Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Taer4g02589 | ATGGCGATAATGCACCAAATTTCTCTCACAAACAACCTTCAATGGAACCACCATAGTACACCTCAATTCAACACCTTCAAACCTACATCATCATCATTAAACAAAAAGTTCAACACCAAATTATCACTCAATACCAATAGAAGCAAAGTTAACTCATCGTTTGATTACAACCATACTGTTCAAACCAGCAACGATCATTACGAGTACGAAAAAGGTTTAATCGGAAACGGTCAACAATACCCTAGGCCGTCGGAGATTCAATGGAAGAAGGAATTGTGTAACGCCGTTCAGCTTATCGGAACTGTTGGTACATCGGTTGAGTTTAAGCAGCTTAGCTCCGGGAAGGTGCTTGCTTGGTGTCGACTTGCTGTTAAAAAATCTGCAACTGATACTACTTGGATCAATTTGACGTTTTGGGATGAGATGGCACATATTGCTTCTCAGCATGTGGAAAAGGGACAACAAATATATGTATCAGGTCGTCTTGTTTCAGATACAGTCGATAGTGATGATGGAAAGCAACAAACATACTATAAGGTGGTTGTTCAACAGCTAAAATTTATTGAGAGAAGCCCACCTTCAGCAGCTTCTAATGATGGAGACTTCAACTACAATTACAATTCCAACTCAAGCTCTATGACAACAGGTAAAAAGCAAAAGAATTATGCAGCAAATGGTACAGGATCTGTAGAAGAACTATGGCAAGCGTTTTTTGCTAATCCCGTTGATTGGTGGGATAATAGGAAGAACAAGAGAAGCCCGAATTACCCAGATTTCAAGCACAAAGACACGGGTGAAGCTTTATGGGTTGAAGGGAGATTGAATCCATCGTGGGTTAAATCTCAGTTATCGGTATTAGATTCACGGATGGAATCTTATCATGATCAAACTGATAATATGCGGTTTGGAGACAAGTTGACACCTTATTAA | 930 | 39.68 | MAIMHQISLTNNLQWNHHSTPQFNTFKPTSSSLNKKFNTKLSLNTNRSKVNSSFDYNHTVQTSNDHYEYEKGLIGNGQQYPRPSEIQWKKELCNAVQLIGTVGTSVEFKQLSSGKVLAWCRLAVKKSATDTTWINLTFWDEMAHIASQHVEKGQQIYVSGRLVSDTVDSDDGKQQTYYKVVVQQLKFIERSPPSAASNDGDFNYNYNSNSSSMTTGKKQKNYAANGTGSVEELWQAFFANPVDWWDNRKNKRSPNYPDFKHKDTGEALWVEGRLNPSWVKSQLSVLDSRMESYHDQTDNMRFGDKLTPY* | 310 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Taer4g02589 | 309 | Pfam | Single-strand binding protein family | 94 | 187 | IPR000424 | GO:0003697(InterPro) | |
| Taer4g02589 | 309 | CDD | SSB-OBF | 96 | 188 | IPR000424 | GO:0003697(InterPro) | |
| Taer4g02589 | 309 | NCBIfam | single-stranded DNA-binding protein | 93 | 225 | IPR011344 | GO:0003697(InterPro)|GO:0006260(InterPro) | |
| Taer4g02589 | 309 | ProSiteProfiles | Single-strand binding (SSB) domain profile. | 92 | 189 | IPR000424 | GO:0003697(InterPro) | |
| Taer4g02589 | 309 | PANTHER | SINGLE-STRANDED DNA-BINDING PROTEIN | 39 | 295 | IPR011344 | GO:0003697(InterPro)|GO:0003697(PANTHER)|GO:0006260(InterPro)|GO:0006264(PANTHER)|GO:0009295(PANTHER)|GO:0042645(PANTHER)|GO:0051096(PANTHER) | |
| Taer4g02589 | 309 | Gene3D | - | 92 | 226 | IPR012340 | - | |
| Taer4g02589 | 309 | SUPERFAMILY | Nucleic acid-binding proteins | 94 | 284 | IPR012340 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Taer4g02589 | K03111 | single-strand DNA-binding protein |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Taer | Taer-Chr4:11788344 | Taer4g02589 | Taer-Chr4:56841511 | dispersed |