AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Taer4g02595 ATGGCATCCATCTCCACCACCTCACCATCTTTCTCTTTGCTCCAAAAACCCACCATCACCACTCACTCTTCTCCGGTTATTGGATTGCCATCAATGAGCAAGATGGGGAGAGTGAGATGTTCGATGGAAGGTAAGCATGCGGTCACATCGGATGACGGTGCATCCAAATTAAGGATGGGTGCACAATCAATGATGGCTGCAGCAGTGACTGCAGCCATGTCGAGTCCTGCAGCCATGGCTCTAGTGGACGAGAGAATGAGCACCGAAGGAACCGGGCTACCGTTCGGTCTAAGCAACAACCTTCTCGGGTGGATCCTTTTTGGCGTGTTTGGTTTGATTTGGACATTTTTCTTTGTCTACACCGGTAGCCTTGAAGAGGATGAAGAGTCGGGTTTATCGCTTTAA 405 49.63 MASISTTSPSFSLLQKPTITTHSSPVIGLPSMSKMGRVRCSMEGKHAVTSDDGASKLRMGAQSMMAAAVTAAMSSPAAMALVDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWTFFFVYTGSLEEDEESGLSL* 135
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Taer4g02595 134 Pfam Photosystem II reaction centre W protein (PsbW) 2 134 IPR009806 GO:0009507(InterPro)|GO:0009523(InterPro)|GO:0015979(InterPro)
Taer4g02595 134 PANTHER PHOTOSYSTEM II REACTION CENTER W PROTEIN, CHLOROPLASTIC 1 134 IPR009806 GO:0009507(InterPro)|GO:0009523(InterPro)|GO:0009535(PANTHER)|GO:0015979(InterPro)|GO:0042549(PANTHER)
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Taer4g02595 K02721 photosystem II PsbW protein
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Taer Taer-Chr4:56908579 Taer4g02596 Taer-Chr4:56912942 tandem