AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Taer5g00684 ATGCAGAAAGTGAAAAAGAAAAAGTATTCTCATTATGAATTTGATACAAAATCACGTATTTTTCTCGAGTGGGATGACAGGAAGGAACGTGTTGTTTCTAAGAAGGAGCAGATAAGTATTGCACACAGAGAGTTGACACCGTTTCTTCCTTTCATTGCACATCACCAAAATGTCATCGGTGATGTCTTTGCAGCTCCTCCTGAATTATTTGAACTCGATAACTTGACCAGTTTGCTATCTTACGAGGTGTGGGAAACTCATCTGTCTGTTCAAGAGAGGGAGTTTCTGACTCAGTTTCTTCCTGAAGGAGCTGAGCCGCATAAAATTGTTCACGAACTGTTGGCTGGGAATAATTTCTTTTTTGGAAATCCATTTTCAAAATGGGGTTCTTCAATTTGCTCAGGTTATTATCATCCTGATGCTGTTCTCCGTCAAGAACAGTCTAACAAGGCTAACAAAGTAGCATATTATTCAGAATTGCATGATTACCATACTAAAATGATACACAGTCTGCAATTGTGGAAGGAAAGATGGACAATAAGCATGAATCCAGAAAATTTAGTGCAAAAGACGCCAAGGCCTAAAAGGGATTTTCACAAAAGTGGATCCTCGCATGAGATTGACTTACAGTATGGTCCTCAGCATGAAATCTGTGCAACATCTGGTTCTTGTTCATGGGATACTGATGATAAATCATGCAATAGTGACAGCCCGGATCGATCAGCTAGCAACGGAGAAGCTTTAGTAAGTGCTTCCGGAACACATTTAGGGAACAAGTATTATAATTCATCTGGTGGGAGATTGGTAGCAAGAACTCACAAAAAAGATAAATCACGCAAGCTCAATATGGAGTGTGGTGATGGAGCCAAATACATGTCATATATTAAGGTTAGCAAGGAGCAGCATGAACGAGTTAAAAGCAGTATGAAACAGCCTAACACCAGCATCCAACGAAGGTCCCTTAATCTTGTTTTAGGAAATCTTGATGGTTTCTGTGTTCAACCATATGAAGTGTTTGAGGAAGAAGAGAAGCAGAAGTTGCATGATCACTGGTTGCATTTGGCAAAGAAAGATCTTCCTGCAGGCTTTGTGAACTGGGGACGTTGGCGATCTGCCAAGTGGCAATTATCAAAGTCCTTGAGGGAAGAATTGGAAGATAAATGGAAGTTAAATGATGGGCCCATTTTGGATTTGTATAATAATCAGGATGCTGAGTTGATGAATGGTGGTCAGGATGATGAGTTGATAACTGGTGCTCAGAATGATGAGTTGATAACTGATGGTCAGGATGAAGATGCAGAACAATCAAGTGAAGAGCAACACATTGACGGAGAAACAAATAATGTAACTTTAATTGCATTAGAGGAGAACATGGAACAAAATGTTATTCCAGTTTATCGGTCAGAAGCAGATCATAATGCTGAATTTCATGATATTACAAACAATTCATGCCAAGATTCTGATCAGAATGAGCATCTGCCTGAAATTGCCGTACATAATAATACCCAAAACTTTTGTTCCGTGACCATCAACAACAATAGTGATGTCATAACCGAATCAGATGTTTTTTCTTCGGGTCTTGTTGATTATCCCGAAAATATAGATCATGCAGATGCTTCTGTTGGTGAACAGTTTCCTCCGCCTAATGCTGCAACTGAAATATGGCCACTAGCTACACTACCAAATGTGTATTACCAACCTACATCTGTAAGCCAAGACTACCCTCCTATTAGTCAATCAAGTTTTCTCAACAGACGATCTGACATTGGAGATTCATTTTTTAACCCTTATGCTAACCAAGACCGTAATGATTTATTATTGCATTCGGTTTTTAAAGATCCCGGGAATTCGAGTTCACATTATCTGGGAGCCAGTCAATTTTCCAGAAATCTAAATTCATCATTACCTCTAGATCCAAGACTTAACATTCAACAGAACATATATGCGGATGTAGCAAACCGGTTTCCCATTCCGAGAGACGAATCCCTGTTGTCACTGGATCAGGTTCAGGGTTGGCCAGGGAACAGTCTCGTTAGCCTGCCAATGTCTGCACCATCTCGTCATCCGTTAAGTCAGAACTGGTTTTCTGACAATGAGGTGGCACGTGATGGGTGGTCAGGTGGCGTCGTAGTCCCAAGCCATGACATCAGAACTGGTGGTCAGGTGGTGGATGAGAGCTTATACAGTGTTTTATCTGAGTGTAACGGGCTGCGTTCCGGTGTTCATTATGGTTCAACTGAGCTTGTCCAGCCCGGGAACTATGTAGACGTGGGGCGTGAATCAGTTCTTCCTACAACCACCAACGGTCTGCCACCACGGGCCGGTAGAGGGTCGGGTCTTAACTACATGGGTGGGAATGAGGGTCAGTTAGGATGGATGAACTTGCAGCGTGGGTTGCCGGAGAATGGGGGGAAACCATTTGCAAGGTTATGGAATGATAAGGATTTAGGATGA 2454 41.81 MQKVKKKKYSHYEFDTKSRIFLEWDDRKERVVSKKEQISIAHRELTPFLPFIAHHQNVIGDVFAAPPELFELDNLTSLLSYEVWETHLSVQEREFLTQFLPEGAEPHKIVHELLAGNNFFFGNPFSKWGSSICSGYYHPDAVLRQEQSNKANKVAYYSELHDYHTKMIHSLQLWKERWTISMNPENLVQKTPRPKRDFHKSGSSHEIDLQYGPQHEICATSGSCSWDTDDKSCNSDSPDRSASNGEALVSASGTHLGNKYYNSSGGRLVARTHKKDKSRKLNMECGDGAKYMSYIKVSKEQHERVKSSMKQPNTSIQRRSLNLVLGNLDGFCVQPYEVFEEEEKQKLHDHWLHLAKKDLPAGFVNWGRWRSAKWQLSKSLREELEDKWKLNDGPILDLYNNQDAELMNGGQDDELITGAQNDELITDGQDEDAEQSSEEQHIDGETNNVTLIALEENMEQNVIPVYRSEADHNAEFHDITNNSCQDSDQNEHLPEIAVHNNTQNFCSVTINNNSDVITESDVFSSGLVDYPENIDHADASVGEQFPPPNAATEIWPLATLPNVYYQPTSVSQDYPPISQSSFLNRRSDIGDSFFNPYANQDRNDLLLHSVFKDPGNSSSHYLGASQFSRNLNSSLPLDPRLNIQQNIYADVANRFPIPRDESLLSLDQVQGWPGNSLVSLPMSAPSRHPLSQNWFSDNEVARDGWSGGVVVPSHDIRTGGQVVDESLYSVLSECNGLRSGVHYGSTELVQPGNYVDVGRESVLPTTTNGLPPRAGRGSGLNYMGGNEGQLGWMNLQRGLPENGGKPFARLWNDKDLG* 818
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Taer5g00684 817 ProSiteProfiles DEUBAD (DEUBiquitinase ADaptor) domain profile. 66 177 IPR044867 -
Taer5g00684 817 MobiDBLite consensus disorder prediction 190 204 - -
Taer5g00684 817 PANTHER NFRKB-RELATED 640 813 IPR024867 GO:0031011(InterPro)
Taer5g00684 817 MobiDBLite consensus disorder prediction 187 206 - -
Taer5g00684 817 CDD DEUBAD-NFRKB 68 174 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Taer5g00684 - -