Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Taer5g00698 | ATGAAGTCACCGCTTGTGAAGTTAGGGCGAAAATTAGCGATGCAGAAGAGCGATGTGAAGGAGATGAGAGATCATCAGTCTTCTGCGCATTTAGATGAGCTTGCTCAGGCTTCGAAGGATATGCAAGAGATGAGAAACTGCTATGACGGTTTGTTATCTGCAGCTGCCGCAACCGCAAATAGTATATATGAATTTTCGGAGTCTCTAAATGAAATGGGGAACTGTTTGATGGGGAAAACCGCTGCGGCCGCTGATGCTGAAAGTGGAAACGCACTATCAACTTTGGGAAATTTGCAATTGGAACTTCAGAAAATTGCTGATATTTATCGTTCTCATGTAGTTGTGACAATTACTAACCCAGCAGACTCTCTTCTCAGTGAGCTACTAAAAGTGGAGGAGATGAAACTTCAGTGTGATGAGAAAAGAGAGGTATATGATCACATGATGGCTCAACATAGAGAGAAGGGAAAAGTAAAAAATGGTAAAGTTGAAAGTTCAGTTGCACAAAAACTGCAAGAAGCTCAAGATGAATATGATGAAGTGGCGAGACTATGTGTATTTCGGGTAAAATCACTTAAAGAAGGACAATGGCGCAGTCTTTTGACGCAAGCTGCTCGCCATCATGCTGCACAGTTGAATTTCTTTCGCAAAGGACTTAAAGCTGTAGAATCCGTTGAACCTTTCATAAGAAATGTTGCACAAAAGCATCGCATTGATTGCCAACTCAGTGGATTGTATGATTGCGGGTCCCAGGAAGGTGAGCCTATGAGTGGCTATGGAAGCGCTGATGATGGAGAATTGAGTTTTGATTATAAACAAAAGAAACATGGACTTGATGATGATGGAACCTCACCAAATCCAATGGAGCTGGACCAGGTAGATGTCCCATATTTTCAAGCTTCAAATGTAGAAGATTTAGAGACAAATCAGAATAAACATAAAAGAGAACAGCTTTTCGGTAAGCAAACTAGAGTTAGCAGCTATTCAGCCCCACTCTACCCTGACAAAAGTAATGCACCCCGAAAGCTTAAAGAAACCCAACCCACACCAAAATTTTACTCTTATGTACTACCTCCACCCAATGTAGACACCCGAAATCCAATTTCAAAGCCCACCATGTCTGTTTCTCATTCAACCCCGTTTCAAAATCCGCAACATGATACCACACCAACTCCTGCTTTGACCTCAAAAGTCCAGTCAACAGTTAAAGTCGGTAACATTGGTAAACCAACCATCCAGTTACCCACTCCATCAACTGGAAGATTTTCATTCTCACAACAAGATAATTATTACAGAAACGATGGTAGTAAAGCAGACAGACGACAATCTTACTCTGGTCCGTTACCACCAAGCAGGCAGTTTTCTTTTAAACTTGCATCTAATAATAGTGGGCCCATTACTTCTACTGAACTTCCTCACCCGCCTTCTCGGACCCCAGTTTCTCAGCCAAATAGCGCGTTATCTCCCTCGTTATCTTCTCCTAAAATAAGCGAGCTTCATGAGCTTCCTCGGCCTCCTTCTAGTCATTTATCTTTCTCTAAACCCGTTCCTATTTCTGGTGGCTTTAGTCGACATTCAGCACCCTTACTCTTAAAAAATCAAGAAATTTCTCCACCTAATAAACGTGCTATGCTAACATCAACTTGTTCACCTCTTCCACTTCCGCCTTCTGCTGTGAAAATCAACTCAAGTAACAGTGGGACCTGA | 1707 | 42.06 | MKSPLVKLGRKLAMQKSDVKEMRDHQSSAHLDELAQASKDMQEMRNCYDGLLSAAAATANSIYEFSESLNEMGNCLMGKTAAAADAESGNALSTLGNLQLELQKIADIYRSHVVVTITNPADSLLSELLKVEEMKLQCDEKREVYDHMMAQHREKGKVKNGKVESSVAQKLQEAQDEYDEVARLCVFRVKSLKEGQWRSLLTQAARHHAAQLNFFRKGLKAVESVEPFIRNVAQKHRIDCQLSGLYDCGSQEGEPMSGYGSADDGELSFDYKQKKHGLDDDGTSPNPMELDQVDVPYFQASNVEDLETNQNKHKREQLFGKQTRVSSYSAPLYPDKSNAPRKLKETQPTPKFYSYVLPPPNVDTRNPISKPTMSVSHSTPFQNPQHDTTPTPALTSKVQSTVKVGNIGKPTIQLPTPSTGRFSFSQQDNYYRNDGSKADRRQSYSGPLPPSRQFSFKLASNNSGPITSTELPHPPSRTPVSQPNSALSPSLSSPKISELHELPRPPSSHLSFSKPVPISGGFSRHSAPLLLKNQEISPPNKRAMLTSTCSPLPLPPSAVKINSSNSGT* | 569 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Taer5g00698 | 568 | CDD | BAR | 40 | 227 | - | - | |
| Taer5g00698 | 568 | MobiDBLite | consensus disorder prediction | 548 | 568 | - | - | |
| Taer5g00698 | 568 | Pfam | BAR domain of APPL family | 30 | 235 | IPR004148 | GO:0005515(InterPro)|GO:0005737(InterPro) | |
| Taer5g00698 | 568 | MobiDBLite | consensus disorder prediction | 446 | 495 | - | - | |
| Taer5g00698 | 568 | MobiDBLite | consensus disorder prediction | 366 | 432 | - | - | |
| Taer5g00698 | 568 | Gene3D | Arfaptin homology (AH) domain-BAR domain | 25 | 241 | IPR027267 | - | |
| Taer5g00698 | 568 | SUPERFAMILY | BAR-IMD domain-like | 32 | 230 | IPR027267 | - | |
| Taer5g00698 | 568 | PANTHER | HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE | 1 | 560 | IPR037488 | - | |
| Taer5g00698 | 568 | MobiDBLite | consensus disorder prediction | 351 | 518 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Taer5g00698 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 161075 | Taer10g00957 | Taer5g00698 | |
| 162364 | Taer2g01839 | Taer5g00698 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Taer | Taer-Chr10:21649898 | Taer5g00698 | Taer-Chr5:6003900 | transposed | |
| Taer | Taer-Chr1:39561036 | Taer5g00698 | Taer-Chr5:6003900 | wgd | |
| Taer | Taer-Chr10:7106402 | Taer5g00698 | Taer-Chr5:6003900 | wgd | |
| Taer | Taer-Chr2:92790631 | Taer5g00698 | Taer-Chr5:6003900 | wgd |