AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Taer5g00699 ATGGCTGTCAAGGCTGCTATTCATTTCTCCTCTGATGTTTTGCATTTGGATCAAGTTAACGATGCTGCCGCCTCGTTGTCATTATACACCACCCGTCTCCCCGCCGGATTGGATGTGAGCGCAGGCAGGAAAAGTTTACCAAAATTTATGGTTGTTGGACACCGTGGTCATGGTATGAACATATTGCAATCGACTGATAAGAGGATGAAAGTGTATAAAGAAAATTCTATTCTTTCCTTCAACAATGCCGCTAATCATCCCCTCGATTTCATCGAGTTCGATGTTCAGGTGACAAAAGACAACATACCAATCATCTTCCATGACAATTTCATCCTCTCTGAAGAAAATGGAAACATAGTCGAAACACGAGTCACCGATTTGACATTGGATGAATTCTTCAGCTATGGTCCTCAACGAGAAACGGGTCAGGTGGGTAAAACTTTGCTGCGAGAATCAAACGGAAAGATTGTCGGGTGGGACGTTGAAGTCGATGATCATTCGTGTACACTTGAAGAAGCATTCCAGAAAGTGAACCCTTGTTTGGGATTCAACATCGAGTTGAAATTCGATGATTACGTTGTTTATGAAGAAGAGTACCTCATTCATGTTCTTCAAGTTATATTAAAGGTGGTATATGAAAATGCCCAAGAAAGACCTGTAATTTTCTCTAGCTTCCAGCCTGATGCAGCCTTGCTTATGAAGAAGTTACAGCATAAATACCCGGTGTACTTCTTGACAAATGGCGGAAATGAGATATTCGATGACGTGCGGATGAACTCGTTAGACGAAGCGAAGAAGCTGGCTATGTCGGGTGGGTTGGACGGAGTTGTTTCGGAAGTAATGGGCATATTTAGAAACCCTTCAGTAGTAAGAGAGATCAAAGAGTCAAATCTTTCCCTCCTTACTTATGGCAGACTAAATAACGTCCCTGAAGCTGTACGCGTTCAATATCTTATGGGCGTAGAAGGTGTCATTGTTGATCTAGTACAAGAAATTACAAGTGCAGTTGCGGGTTTAATAACAGGATTCGAAGGAGAGCAAGGAGGTTCGTATGCGAAAGAAAATGCTGAACAAATCGAACTGTCGCTTTTGTTGAATTTGATCTCGCAAGTGATTCAACATTGA 1125 42.04 MAVKAAIHFSSDVLHLDQVNDAAASLSLYTTRLPAGLDVSAGRKSLPKFMVVGHRGHGMNILQSTDKRMKVYKENSILSFNNAANHPLDFIEFDVQVTKDNIPIIFHDNFILSEENGNIVETRVTDLTLDEFFSYGPQRETGQVGKTLLRESNGKIVGWDVEVDDHSCTLEEAFQKVNPCLGFNIELKFDDYVVYEEEYLIHVLQVILKVVYENAQERPVIFSSFQPDAALLMKKLQHKYPVYFLTNGGNEIFDDVRMNSLDEAKKLAMSGGLDGVVSEVMGIFRNPSVVREIKESNLSLLTYGRLNNVPEAVRVQYLMGVEGVIVDLVQEITSAVAGLITGFEGEQGGSYAKENAEQIELSLLLNLISQVIQH* 375
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Taer5g00699 374 FunFam Glycerophosphodiester phosphodiesterase GDPD2 40 338 - -
Taer5g00699 374 SUPERFAMILY PLC-like phosphodiesterases 47 330 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Taer5g00699 374 Pfam Glycerophosphoryl diester phosphodiesterase family 54 329 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Taer5g00699 374 Gene3D Phosphatidylinositol (PI) phosphodiesterase 42 337 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Taer5g00699 374 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 42 343 IPR051578 GO:0046475(PANTHER)
Taer5g00699 374 ProSiteProfiles GP-PDE domain profile. 49 336 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Taer5g00699 K18696 glycerophosphodiester phosphodiesterase [EC:3.1.4.46]
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Event-related genes

Select Gene_1 Gene_2 Event_name
161076 Taer10g00958 Taer5g00699
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Taer Taer-Chr10:7119083 Taer5g00699 Taer-Chr5:6013876 wgd