AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Taer5g00702 | ATGGCGGATCTCAATCTGCCACCACCGGATCAACACGATGAACAATCAGACTCATCATCATCAATCAACGATCAAACTCACCGTGAAAAACTCTTCCAAAACATAGATCAATTCATTTCCCTATTAACAAACCTAGACCAATCAGAATCATCATCACCGCCTGAAATCACTGAATCTGTTACAGCTTTTGCAGATCTGTTTGATGTTTTGATCGTTGAATACGAATCCGGATCGAAAAAATGGATCCACCTTGAAGAACATGAATCATCTCGTTTTCTAGAGTTTGTTGATCGAACCACGAACGTGCTCAAGTCGTTTTCCAGGTTTCATTCTGATCAAAATTACGCTGCTGTTATTAACCGGTTGAGCGGGATCCAGCAACGTGCAATGTCGATACTGGAGGTTGAATTCAAATCGATTTTGGATGATTATCAAACGTCGTATGATCGAGATCAAAAAGGTAAAACGGATGAGGCGAAAACGAAACAGAAACAGTTATCGTCTTCTGCAAGTAATGTTCACGAGGCTCCACAACCGGAATTGCAGGATCAATCTGAGTCTCAGCTTGAAGAAGACGAGTTTCTAGGTTATTCAGATGAGATGATATCAAATCTGAATAAATTAGCTAAAGGATTGATCTCTGGAGGACACGAATCGGAGTGTACTGAATTGTATTTCTTCGTTCGTCGAAACGCAATGGAAGAAAACCTGAAGCTTCGTCGGTTCGACAAGTTTTCAATCGATGAAATGCAGAAGATGCAATGGGATCCAATCGAAAAAGAAGTTTCTTCATGGACGCATATGTTTAAACAGTTTTGTACCTCGCTTTTACCTAGCGAAAGGAGGCTCGCGGACGCTGTGTTTAACGACGAAAAAGCGATCTCAAACAAGTTGTTTACGAGCCTAACACGAATCGTTTTACTGATCTTCTTAAGTTTTGCGGAAGCTGTCATGTTAACGAAACGATCAGCTGAAAAACTGTTCAAATATTTGGACATTTACGAGACGTTACGTGACACAATCCCGGAGATTGAGAAATTAATCTCGGATGAAGGTTTACATCAACTGAAATCATCAGCTTCATTGATCAACACAATGCTAGGTGAATCGATTTACAACATTTTTCTAGAACTCGAAACGTCTATTAAAACCGACGCGTCGAAAACTCCTGTACCAGGCGGAGCCGTGCATCCGATCACTCGTTACGCTATGAATTATCTAAAATACGCTTGTGAATACAGTAACACGTTAGAGCAAATTTTTCGTGAGCATAAACGAATAGTCCGACCCGAATCTGAGTTTGGATCCGATTCTGGATCCGAATTAGAACATCAACATAGTCAAAGCAACGAAATGTCACCCTTTCAGTCTCAGTTGTTAAAGATCATGGATTTGTTAGATGCAAACCTCGAAACAAAGTCGAAACTTTATAAAGATCCGTCGTTGAGTTTGATCTTCATGATGAACAATGGTCGTTACATATTGCAGAAGACAAAAGGAACAGGTGAAATAAGAACTTTATTAGGTGATCCATGGGTTAGGAAACGTTCGTCCGATTTACGAATTTATCATACGAATTACAAGCGCGAAACGTGGACAAGATTGTTGCAATGTTTGAGCCATGATGGGTTGAGTGTGAATGGGAAGGTGATGAAGCCAGTGTTGAAGGAAAGGTTCAAAAGTTTTAATGCAATGTTTGATGAGATACATAGAACACAAGTGACATGGGTGGTGAGTGATGAACAATTGCAGTCGGAACTGCGAGTGTCGATATCGGCGATTGTGATTCCGGCTTATCGGTCGTTTATGGGGAGGTTTAGTCAAGTGTTTACTCCCGGGAGGCAAACGGAGAAGTATATTAAGTATCAACCTGAGGATATTGAGACGTGTATTGAAGAGTTGTTTGATGGAAGAACAAGTCAACAAAGTAAGAAGAGAAGACGCTTTATCATGATAAATGGTAGTTTGGTAAATGAGACCCCTCCCCAAGAAACGTATCTACATTCCTCCGAGTCTGATACGAGTCTTCCTTCAATCAAAAACATTAAAATCTCTCTTTCAATTCATTCATTCAATCAATTCCCCCAAATTTCACCTCTCAATTCTCAAAACCCTAAATGCTTCATCAATTCAACCATCCTTCATCAACACATCTGTTACCATCTCTTTAATCAGGAATAA | 2181 | 40.07 | MADLNLPPPDQHDEQSDSSSSINDQTHREKLFQNIDQFISLLTNLDQSESSSPPEITESVTAFADLFDVLIVEYESGSKKWIHLEEHESSRFLEFVDRTTNVLKSFSRFHSDQNYAAVINRLSGIQQRAMSILEVEFKSILDDYQTSYDRDQKGKTDEAKTKQKQLSSSASNVHEAPQPELQDQSESQLEEDEFLGYSDEMISNLNKLAKGLISGGHESECTELYFFVRRNAMEENLKLRRFDKFSIDEMQKMQWDPIEKEVSSWTHMFKQFCTSLLPSERRLADAVFNDEKAISNKLFTSLTRIVLLIFLSFAEAVMLTKRSAEKLFKYLDIYETLRDTIPEIEKLISDEGLHQLKSSASLINTMLGESIYNIFLELETSIKTDASKTPVPGGAVHPITRYAMNYLKYACEYSNTLEQIFREHKRIVRPESEFGSDSGSELEHQHSQSNEMSPFQSQLLKIMDLLDANLETKSKLYKDPSLSLIFMMNNGRYILQKTKGTGEIRTLLGDPWVRKRSSDLRIYHTNYKRETWTRLLQCLSHDGLSVNGKVMKPVLKERFKSFNAMFDEIHRTQVTWVVSDEQLQSELRVSISAIVIPAYRSFMGRFSQVFTPGRQTEKYIKYQPEDIETCIEELFDGRTSQQSKKRRRFIMINGSLVNETPPQETYLHSSESDTSLPSIKNIKISLSIHSFNQFPQISPLNSQNPKCFINSTILHQHICYHLFNQE* | 727 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Taer5g00702 | 726 | MobiDBLite | consensus disorder prediction | 11 | 26 | - | - | |
| Taer5g00702 | 726 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
| Taer5g00702 | 726 | Gene3D | Exocyst complex component Exo70 | 72 | 646 | - | - | |
| Taer5g00702 | 726 | PANTHER | EXOCYST COMPLEX PROTEIN EXO70 | 72 | 637 | IPR004140 | GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(PANTHER)|GO:0006887(InterPro) | |
| Taer5g00702 | 726 | MobiDBLite | consensus disorder prediction | 149 | 189 | - | - | |
| Taer5g00702 | 726 | MobiDBLite | consensus disorder prediction | 431 | 450 | - | - | |
| Taer5g00702 | 726 | Pfam | Exocyst complex component Exo70 N-terminal | 85 | 142 | - | - | |
| Taer5g00702 | 726 | SUPERFAMILY | Cullin repeat-like | 82 | 636 | IPR016159 | - | |
| Taer5g00702 | 726 | Pfam | Exo70 exocyst complex subunit C-terminal | 263 | 633 | IPR046364 | GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro) | |
| Taer5g00702 | 726 | MobiDBLite | consensus disorder prediction | 163 | 184 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Taer5g00702 | K07195 | exocyst complex component 7 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Taer | Taer-Chr4:59964003 | Taer5g00702 | Taer-Chr5:6042012 | dispersed | |
| Taer | Taer-Chr5:6042012 | Taer9g01802 | Taer-Chr9:13337133 | dispersed | |
| Taer | Taer-Chr8:61538638 | Taer5g00702 | Taer-Chr5:6042012 | transposed | |
| Taer | Taer-Chr5:6042012 | Taer8g02064 | Taer-Chr8:61061357 | wgd |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Taer1g02428 | . | 22 | 636 | EXO70 exocyst subunit family | AT4G31540 | 28.882 | 6.15e-78 | 261.0 | |
| Taer1g02705 | ACH,WGDA | 26 | 633 | EXO70 exocyst subunit family | AT1G72470 | 64.412 | 0.0 | 778.0 | |
| Taer1g04736 | ACH,WGDA | 9 | 658 | EXO70 exocyst subunit family | AT3G29400 | 48.563 | 0.0 | 583.0 | |
| Taer2g00130 | . | 7 | 632 | EXO70 exocyst subunit family | AT5G03540 | 75.517 | 0.0 | 965.0 | |
| Taer2g02092 | ACH | 9 | 658 | EXO70 exocyst subunit family | AT3G29400 | 46.687 | 0.0 | 558.0 | |
| Taer2g03108 | ACH | 24 | 682 | EXO70 exocyst subunit family | AT5G50380 | 57.037 | 0.0 | 724.0 | |
| Taer2g03445 | ACH | 38 | 324 | EXO70 exocyst subunit family | AT3G14090 | 31.25 | 3.27e-36 | 137.0 | |
| Taer3g02571 | . | 9 | 684 | EXO70 exocyst subunit family | AT4G31540 | 68.343 | 0.0 | 952.0 | |
| Taer4g02854 | ACH | 1 | 624 | EXO70 exocyst subunit family | AT5G58430 | 57.009 | 0.0 | 728.0 | |
| Taer4g02991 | . | 7 | 610 | EXO70 exocyst subunit family | AT2G39380 | 45.603 | 0.0 | 540.0 | |
| Taer4g02992 | . | 2 | 610 | EXO70 exocyst subunit family | AT2G39380 | 45.32 | 0.0 | 544.0 | |
| Taer5g00702 | . | 78 | 694 | EXO70 exocyst subunit family | AT5G13990 | 46.855 | 0.0 | 546.0 | |
| Taer5g00823 | ACH,WGDA | 9 | 658 | EXO70 exocyst subunit family | AT3G29400 | 42.553 | 3.31e-166 | 488.0 | |
| Taer6g01913 | WGDA | 32 | 608 | EXO70 exocyst subunit family | AT3G09520 | 50.344 | 0.0 | 558.0 | |
| Taer6g04372 | . | 12 | 686 | EXO70 exocyst subunit family | AT4G31540 | 40.435 | 3.07e-157 | 467.0 | |
| Taer7g00299 | ACH | 15 | 611 | EXO70 exocyst subunit family | AT3G14090 | 34.338 | 3.85e-92 | 294.0 | |
| Taer7g00301 | . | 21 | 612 | EXO70 exocyst subunit family | AT3G14090 | 36.957 | 1.79e-105 | 327.0 | |
| Taer7g00304 | ACH,WGDA | 24 | 633 | EXO70 exocyst subunit family | AT1G72470 | 62.679 | 0.0 | 763.0 | |
| Taer8g00416 | ACH,WGDA | 25 | 632 | EXO70 exocyst subunit family | AT1G72470 | 62.282 | 0.0 | 757.0 | |
| Taer8g02064 | . | 6 | 631 | EXO70 exocyst subunit family | AT5G52340 | 70.607 | 0.0 | 943.0 | |
| Taer8g02120 | . | 1 | 644 | EXO70 exocyst subunit family | AT5G13150 | 38.671 | 1.68e-149 | 446.0 | |
| Taer9g01802 | ACH | 1 | 624 | EXO70 exocyst subunit family | AT5G58430 | 62.791 | 0.0 | 792.0 | |
| Taer10g00441 | . | 40 | 611 | EXO70 exocyst subunit family | AT2G39380 | 44.61 | 2.93e-154 | 456.0 | |
| Taer10g00764 | WGDA | 32 | 604 | EXO70 exocyst subunit family | AT3G09520 | 48.962 | 0.0 | 543.0 | |
| Taer11g00499 | ACH | 24 | 683 | EXO70 exocyst subunit family | AT5G50380 | 54.572 | 0.0 | 677.0 |