AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Taer5g00709 ATGGAAATGCAAAACGACTTCGATCGGCTCTTGTTCTTCGAGCATGCTCGCCGCAGTTCTGAAGCTACCTACGAGAAAAACCCTCTCGATACCGAGAACTTGACTAGATGGGGAGGTGCGTTGCTTGAATTATCGACGTTTCAGACTGTTCAGGAATCAAAATCGATGATTAAAGATGCTATATCGAAATTGGAAGAAGCGTTGGCTATTGATCCGAAAAAGCATGATGCTTTGTGGTGTATGGGAAATGCTCAAACTTCTTATGCTTTTTTGACTCCTGATAAAGATGAAGCTAAGGGTTACTTTGATTCAGCTTATGATTACTTTGAGAAGGCTGTTACTGAGGATCCAGGGAACGAGCTTTACCAAAAATCATTTGAAGTGGCTGCGAAGGCTCCTGAATTACACTCGGAGCTCCATAAGCAGGGTCTTAGTCAGCAAGCTATGGGACCAGTGGCTGGAGGAGGTCCTTCAACTTCTTCAAGTGTCAAGGGTCCGAAGTCACAGAAGAGCAGCGATCTGAAGTATGATATATTTGGTTGGGTGATTCTTGCTGTAACTATCGTGGCGTGGGTTGGATTTGCCAAAGCAAACGTACCTTCACCCCCTCCACGATAA 618 44.82 MEMQNDFDRLLFFEHARRSSEATYEKNPLDTENLTRWGGALLELSTFQTVQESKSMIKDAISKLEEALAIDPKKHDALWCMGNAQTSYAFLTPDKDEAKGYFDSAYDYFEKAVTEDPGNELYQKSFEVAAKAPELHSELHKQGLSQQAMGPVAGGGPSTSSSVKGPKSQKSSDLKYDIFGWVILAVTIVAWVGFAKANVPSPPPR* 206
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Taer5g00709 205 MobiDBLite consensus disorder prediction 152 169 - -
Taer5g00709 205 Pfam Plant specific mitochondrial import receptor subunit TOM20 7 196 - -
Taer5g00709 205 SUPERFAMILY TPR-like 13 124 IPR011990 GO:0005515(InterPro)
Taer5g00709 205 Gene3D Tetratricopeptide repeat domain 1 149 IPR011990 GO:0005515(InterPro)
Taer5g00709 205 PANTHER MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20-1-RELATED 1 204 IPR010547 GO:0005742(InterPro)|GO:0045040(InterPro)
Taer5g00709 205 MobiDBLite consensus disorder prediction 140 171 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Taer5g00709 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Taer Taer-Chr1:39738094 Taer5g00709 Taer-Chr5:6087372 wgd