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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Taer8g02264 ATGGCTCTTTTGGAATCAAACAATAACAGAGGGGAGGTAAGAATTTACGAAAATTTGGATGAACTGAGCACGGATTTGGCTGATTATATAGCAGAATTATCCGAGGCATCGGTTAAAGAACGAGGCTTTTTTGCCATTGCTTTATCTGGTGGTTCTGTCATTAGCTTGATGAGGAATTTGTGTGGAGCTCCTTATAACAAGACTGTTGATTGGTCGAAATGGTATATATTTTGGGCCGATGAACGAGTTGTTGCGAAGAATCATGTTGATAGTAACTATAAGCTTGCTAAAGATCATCTTTTGTCGAAGTTGCCTATTGTTCCTAGCCATGTACATTCCATCAATGATTCTCTCACTGCAGAAGAAGCTGCAAACGAATACGAGTTTGTAATCCGTCAACTGGTCAGAACTCGTGTGGTCAACGTTTCTGAAGTCAGCGACTGCCCGAAGTTTGACCTGATCCTTCTAGGAATGGGTCCGGATGGCCATGTGGCGTCTTTGTTTCCAAATCATTCGGTTCTTGAAGAAAAGAATGAATGGGTGACATTTATCACCACTTCCCCTAAGCCTCCACCTGAAAGAATCACATTCACACTGCCTGTTATTAACTCGGCCGCCAATGTGGCGGTTGTGGTAACAGGTGGCGGGAAAGCGGAAGCTTCCCGCCTGGCGATAGATGATTTGGGACCCGGGAGTCCGGTTTTGCCAGCTAGGATGATTGAACCAACAGTAGGGAAATTGGTGTGGTTTTTGGATAACCAAGCTGCTTCAAAGCTTAAGGGCTTTTCTCAATTTTCTAAGTAG 804 44.03 MALLESNNNRGEVRIYENLDELSTDLADYIAELSEASVKERGFFAIALSGGSVISLMRNLCGAPYNKTVDWSKWYIFWADERVVAKNHVDSNYKLAKDHLLSKLPIVPSHVHSINDSLTAEEAANEYEFVIRQLVRTRVVNVSEVSDCPKFDLILLGMGPDGHVASLFPNHSVLEEKNEWVTFITTSPKPPPERITFTLPVINSAANVAVVVTGGGKAEASRLAIDDLGPGSPVLPARMIEPTVGKLVWFLDNQAASKLKGFSQFSK* 268
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Taer8g02264 267 CDD 6PGL 20 251 IPR005900 GO:0005975(InterPro)|GO:0006098(InterPro)|GO:0017057(InterPro)
Taer8g02264 267 Gene3D - 8 262 - -
Taer8g02264 267 NCBIfam 6-phosphogluconolactonase 15 259 IPR005900 GO:0005975(InterPro)|GO:0006098(InterPro)|GO:0017057(InterPro)
Taer8g02264 267 Pfam Glucosamine-6-phosphate isomerases-6-phosphogluconolactonase 19 249 IPR006148 GO:0005975(InterPro)
Taer8g02264 267 FunFam Probable 6-phosphogluconolactonase 8 260 - -
Taer8g02264 267 SUPERFAMILY NagB-RpiA-CoA transferase-like 13 260 IPR037171 -
Taer8g02264 267 Coils Coil 19 39 - -
Taer8g02264 267 PANTHER 6-PHOSPHOGLUCONOLACTONASE 5 260 IPR039104 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Taer8g02264 K01057 6-phosphogluconolactonase [EC:3.1.1.31]
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Event-related genes

Select Gene_1 Gene_2 Event_name
437928 Taer7g03565 Taer8g02264
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
5270866 Taer Taer2g01620 Taer-Chr2:90763244 Taer8g02264 Taer-Chr8:62786937
5273379 Taer Taer6g02487 Taer-Chr6:18203298 Taer8g02264 Taer-Chr8:62786937
5274588 Taer Taer8g01378 Taer-Chr8:52914615 Taer8g02264 Taer-Chr8:62786937
5291745 Taer Taer7g03565 Taer-Chr7:42258107 Taer8g02264 Taer-Chr8:62786937
5292125 Taer Taer8g02264 Taer-Chr8:62786937 Taer9g03081 Taer-Chr9:30985744