AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tako4g02937 ATGAACCATCGATGGCGTTCAAATTCTTGTTGCATTTACTGCATGAAGCATAAAACCAACCAGAACCATGATCCACTTGTACTATCTTTGCTAAGAAAGGGGGAATCTGAAAAAATCAAAAATTTCACATTTCAGGTATCGTCTGTGAAGTTTCAATACACCGTTTTTGGTGCCGCCGTTTCTCCAAACTCTTCGTCGTCTTCACAGAAATCGCATGCATGCCGCATCCAATCAATCAAAGCGACTGCAACTCAGGCACCTCCTGCTGTTCCAAAGTCCAGCACCAAAGCCAAGACTAAAGTTGGAATCAATGGTTTTGGAAGAATTGGAAGGTTGGTTTTGAGAATAGCAACATCTAGAGATGATATTGAGGTTGTTGCAGTCAATGACCCTTTTATTGACTCCAAATACATGGCGTACATGTTGAAATATGATTCTACTCATGGCCTATTCAAAGGAACCATCAATGTTATTGATGAATCCACTTTGGAAATCAATGGAAAGCAAATAAAACAACAATTCCATGGGGTGATTTTGGAGTTGACTAATGTTGTAGAATCTTCTGGAGTCTTCACAACACTTGATAAGGCTGCAGCACACAAGAAGGGTGGCGCAAAGAAGGTGGTGATATCAGCTCCATCAGCTGATGCACCAATGTTTGTTGTATATTACGAACTTCCTACTAAATGTCAAATGCGCCGGCCGAATCTGCCGGAGTTAAATAGAGGATATGCTATTAGCGTCACCGGTGCGAAAGCTAGTGAGAGAAACGCATTAAAGCCGATCATGTTGCTTCACAGTTGGACCTTTTCTTGTACTTCTTCTTCCCGGTTGCTACATTCCGCAAGTCAAACCGGCGGAATCGATTGCGAAACTACTAGTGTGTATTTGAGAAGGAGAAAAATCAAAGTATCTTCGTCACTTGCGTCGTTCCAAGCTGGAACGGATGTAATCGCTGATATTGCTCACAATAAGGTGCTGATTTCAGCAGCTGCCTGTGCTGCAATTGGACAGTTGACAAAGCCTTTCACTGCTTCCATTTTATATCAAAGAGCTTTTGATCCAAAAGTTGCACTTCAGGCTGGAGGATTTCCCTCAACTCATTCTTCTGCTGCTGTGGCTTCTGCAATGTCTCTTGGTCTAGAAAGGGATTTCTCTGATTCAATTTTTGGACTAGCGGTTGTGTATGCTTGTCTTACCATGTATGATGCCCAGGGTGTTAGAAGGGAAGTTGGAGTCCATGCAAAAACACTAAACAAAGTACTATTAACCACCACAAACCAATCCAAAAAACCCTTATCAAATCAAGAATCTATCAAATTTGATGAAACAACTACTTGCATGCAAGATTTTCACAAAGAAACAGTCGTTCTAACACCCGATAAAATCACAAAAGAATCAGAAAATGTTTCTGTTTCTGTTTCTGGTTCACTCAAAGAATCAATCGGTCACACAGAAATTGAAGTGGCCGCAGGTGCTTTGTTGGGCTTACTTGGAACCTTAGCTGTCTACTCCTTATGA 1521 41.42 MNHRWRSNSCCIYCMKHKTNQNHDPLVLSLLRKGESEKIKNFTFQVSSVKFQYTVFGAAVSPNSSSSSQKSHACRIQSIKATATQAPPAVPKSSTKAKTKVGINGFGRIGRLVLRIATSRDDIEVVAVNDPFIDSKYMAYMLKYDSTHGLFKGTINVIDESTLEINGKQIKQQFHGVILELTNVVESSGVFTTLDKAAAHKKGGAKKVVISAPSADAPMFVVYYELPTKCQMRRPNLPELNRGYAISVTGAKASERNALKPIMLLHSWTFSCTSSSRLLHSASQTGGIDCETTSVYLRRRKIKVSSSLASFQAGTDVIADIAHNKVLISAAACAAIGQLTKPFTASILYQRAFDPKVALQAGGFPSTHSSAAVASAMSLGLERDFSDSIFGLAVVYACLTMYDAQGVRREVGVHAKTLNKVLLTTTNQSKKPLSNQESIKFDETTTCMQDFHKETVVLTPDKITKESENVSVSVSGSLKESIGHTEIEVAAGALLGLLGTLAVYSL 506
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tako4g02937 506 Pfam Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 100 193 IPR020828 GO:0051287(InterPro)
Tako4g02937 506 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 98 224 IPR036291 -
Tako4g02937 506 SMART gp-dh-n-7 99 230 IPR020828 GO:0051287(InterPro)
Tako4g02937 506 Gene3D - 88 225 - -
Tako4g02937 506 PANTHER GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE 94 222 IPR020831 GO:0016620(InterPro)
Tako4g02937 506 FunFam Glyceraldehyde-3-phosphate dehydrogenase 96 228 - -
Tako4g02937 506 Pfam Divergent PAP2 family 323 497 IPR003832 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tako4g02937 K09775 uncharacterized protein