AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tako4g03024 ATGAATAGTAATCCAGCTACGCCGATGAACGCACACGCTCCGTCATCAAGCTCCGGTGGTGCTGGATCCCCTGATTCATCTGCTGCAAGGAGAAATTCCAAGCGACCTAAATATTCCAGGTTTACTCAACAAGAACTTCCAGCTTGCAAGCCAATTCTCACTCCAAAATGGGTGATTTCAGCATTCATGCTTGTAACCATAGTCTTCATACCAATCGGACTTGCTTCCCTCTTCGCCTCTCGTGACGTAGTTGAAATTATCGATCGATACGACAACGCCTGCGCACCACCAGGTAGTTCAAAAAGTCAAAAAGTCGAATTCATCCAATCCAATCTAAACAAAACGTGCGTCAGAACCTTAACAGTCACAAAGCGTATGAAGCAACCTATATACGTCTACTATCAACTCGACAATTTCTACCAAAACCATCGAAGATACGTAAAAAGCCGAAGTGATCAGCAATTAAGAAACCGTGGTGATGAAAACGACACGAGTACATGTAAGCCTGAACACAATGCAAATGGGATGCCGATTGTACCATGTGGACTGGTGGCGTGGAGTTTGTTCAATGACACGTATGCATTTTCATCCAGTAACAACCCGCAATTGAACGTGAACAAGAGACATATTTCATGGAAAAGTGATCGGGAGGATAAATTTGGGAGTGATGTGTTTCCGAAAAATTTCCAGAATGGAAATATTATTGGTGGTGCAAGACTTAATGAATCTATTCCGTTAAGTGAGCAAGAAGATCTTATTGTATGGATGCGAACCGCAGCCCTCCCAACATTTAGAAAGTTATATGGGAAAATAGAAGTGGATCTTCAAGCAGGCGAATCTATAAATGTTGTGGTACAAAATAACTACAACACTTATAGTTTTAGTGGAAAGAAAAAACTTGTGCTTTCAACAACAAGTTGGCTTGGCGGGAAAAATAATTTCATTGGTATCGCATATCTTGCGGTTGGTGGATTGTGCTTCTTGCTAGCTACGGTTTTCACCATCATATATTTATTTAAACCAAGGCATCTTGGAGACCCGACTTATTTGTCATGGAACAGAAACCCGGGCGGTCATTAA 1080 41.67 MNSNPATPMNAHAPSSSSGGAGSPDSSAARRNSKRPKYSRFTQQELPACKPILTPKWVISAFMLVTIVFIPIGLASLFASRDVVEIIDRYDNACAPPGSSKSQKVEFIQSNLNKTCVRTLTVTKRMKQPIYVYYQLDNFYQNHRRYVKSRSDQQLRNRGDENDTSTCKPEHNANGMPIVPCGLVAWSLFNDTYAFSSSNNPQLNVNKRHISWKSDREDKFGSDVFPKNFQNGNIIGGARLNESIPLSEQEDLIVWMRTAALPTFRKLYGKIEVDLQAGESINVVVQNNYNTYSFSGKKKLVLSTTSWLGGKNNFIGIAYLAVGGLCFLLATVFTIIYLFKPRHLGDPTYLSWNRNPGGH 359
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tako4g03024 359 Pfam LEM3 (ligand-effect modulator 3) family - CDC50 family 77 342 IPR005045 GO:0016020(InterPro)
Tako4g03024 359 MobiDBLite consensus disorder prediction 149 171 - -
Tako4g03024 359 MobiDBLite consensus disorder prediction 149 167 - -
Tako4g03024 359 MobiDBLite consensus disorder prediction 1 29 - -
Tako4g03024 359 PIRSF Lem3-Cdc50 7 355 IPR005045 GO:0016020(InterPro)
Tako4g03024 359 PANTHER CELL CYCLE CONTROL PROTEIN 50 27 351 IPR005045 GO:0005783(PANTHER)|GO:0005794(PANTHER)|GO:0005886(PANTHER)|GO:0016020(InterPro)
Tako4g03024 359 MobiDBLite consensus disorder prediction 1 40 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tako4g03024 K26935 cell cycle control protein 50