AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tako4g03033 ATGGAGGAGAATTCCGGTAATGGTGGTGCTACCGATCAGATTAGTGATCGGAAGATGAATTACACGGAGGACGGGTGTCTTTCCGCCGTCGATGTGGCTGATACTCGCTCGTGGAGACTGGATATCAACAGTTTCCGGCTGCCGGAAAGCTCCGTTGAGGATAATCAGTCTTCCGCTCTCCGCCGCGTGCTAATTCCTACTCCAAGAACAAAGAGAAAAATTAAAGCATATTATAAGAAGCAAGAAAGCCTCTTTGAAGGGTTCAATGAGATGGAAATAATAAACAAATCAGGTTCTTTACCTGGAGCCCTTACTGAGGATGAAATGGAGAATCTTGCTAAAAATGAGAGGATGGCGATATACGTATCCAACGTAGCTAACTTGATTCTTTTCGTTGCTAAACTTTACGCCTCCATCGAGAGCAGATCATTAGCAGTGATAGCATCAACTCTTGATTCCTTTCTCGATTTGTTATCTGGATTCATTCTATGGTTTACTTCTAACGCCATGAGAAACCCTAATAGTTATCGCTATCCAATCGGGAAGAATCGAATGCAACCTGTTGGAATCATTGTTTTTGCATCAGTAATGGCAACTCTCGGGTTCCAAATATTGCTAGAATCTGCAAGAGAGCTCCTTGCCAAGACACATCCTAGCAAGAACCATGATAACGAAGAATGGGTGATTGGAATCATGGTTTCCGTGACAATAGTGAAATTTTTTCTCATGATATATTGCCGAAGATTTGAAAACGCAATTGTGAGAGCATACGCTCAAGATCATTTCTTCGATGTCATCACTAATTCTATTGGATTAGCAGCAACTGTATTAGCCGTACGCTACAAATGGTGGATTGATCCTCTTGGCGCCATAATCATTGCGTTATATACGATTAATACATGGACAAAGACGGTTATAGAGAATGTACGATCTTTAATCGGGAGAACAGCACCACCAGAGTTCTTGTCAAAACTGACGTATTTGGTATGGAACCATCACGAAGAAATACAACACATTGATACAGTTAGAGCATACACATTTGGGGGTCATTACTTTGTGGAGGTAGACATAGTGTTGCCACAAGATATGATACTCATCGAAGCTCATAATATTGGTGAAATGCTACAAGAAAAACTAGAGCAATTGGCGGAAGTTGAACGTGCTTTTGTTCATATCGATTTTGAGTTTACTCACACACCCGAACATAAGGGAAAGGTTTGA 1221 41.2 MEENSGNGGATDQISDRKMNYTEDGCLSAVDVADTRSWRLDINSFRLPESSVEDNQSSALRRVLIPTPRTKRKIKAYYKKQESLFEGFNEMEIINKSGSLPGALTEDEMENLAKNERMAIYVSNVANLILFVAKLYASIESRSLAVIASTLDSFLDLLSGFILWFTSNAMRNPNSYRYPIGKNRMQPVGIIVFASVMATLGFQILLESARELLAKTHPSKNHDNEEWVIGIMVSVTIVKFFLMIYCRRFENAIVRAYAQDHFFDVITNSIGLAATVLAVRYKWWIDPLGAIIIALYTINTWTKTVIENVRSLIGRTAPPEFLSKLTYLVWNHHEEIQHIDTVRAYTFGGHYFVEVDIVLPQDMILIEAHNIGEMLQEKLEQLAEVERAFVHIDFEFTHTPEHKGKV 406
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tako4g03033 406 FunFam Metal tolerance protein 11 315 395 - -
Tako4g03033 406 Gene3D Cation efflux protein, cytoplasmic domain 316 394 IPR036837 -
Tako4g03033 406 NCBIfam cation diffusion facilitator family transporter 119 393 IPR002524 GO:0006812(InterPro)|GO:0008324(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tako4g03033 406 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 317 393 IPR036837 -
Tako4g03033 406 Pfam Cation efflux family 121 313 IPR002524 GO:0006812(InterPro)|GO:0008324(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tako4g03033 406 Gene3D Cation efflux protein transmembrane domain 117 312 IPR027469 -
Tako4g03033 406 SUPERFAMILY Cation efflux protein transmembrane domain-like 114 314 IPR027469 -
Tako4g03033 406 FunFam Metal tolerance protein 11 119 312 - -
Tako4g03033 406 PANTHER MITOCHONDRIAL METAL TRANSPORTER 1-RELATED 61 403 IPR050291 GO:0008324(PANTHER)|GO:0016020(PANTHER)
Tako4g03033 406 Pfam Dimerisation domain of Zinc Transporter 319 393 IPR027470 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tako4g03033 - -