Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tako4g03043 | ATGGATGCTAGTCGAAAGGAATGTGCTGCATGCATGGTTGGTCTACCAGTCCCATTCAGATACGAATACCTTATGGCCGAGACTATTTTTTCTCAGCTTCTTTTACTGCCTGAGCCCCCATTCAAACCCATGTATTACACACTTGTGATAATAGACCTGTGTAAGTCTCTTCCAGGTGCTTTTCCTGCAGTTGTGGCTGGGGCTGTTCGTGCCCTTTTTGATAGAATAAGTGAGTTAGATATGGAGTGTAGGACCCGCCTCATTCTTTGGTTCTCACACCATTTATCAAACTTTCAATTCATTTGGCCATGGGACGAGTGGGCATATGTCTTGGAACTTCCAAAGTGGGCCCCACAACGTGTATTTGTCCAAGAGGTTCTCGATAGAGAAGTCCGTTTATCATACTGGGATAAAGTAAAACAGAGCATTGAAAGCACTCCAGCTCTAGAAGAACTCCTCCCACCAAAAGGCGGGCCCGACTTCCGATACACTCCAGACCAAAACCAAGAAGATACCAACAACAAAACCGAACACACCCTTTCAACCGAACTTAATTCAATGGTAAAATCAAGAAAAACATCGCGTGACATCATCACATGGCTAGAAGAATCCGTGATCCCAAACAACAGCCTCCAGCTTGCATTAAGAGTAACCATTCAGACACTTCTGGACATCGGGTCCAAATCATTCACGCATCTGATTACAGTTCTGGAGAGGTACGGCCAGGTCATCGCGAGGGTCTGCCCGGATGAGGAAACGCAGGGGGTTTTGATTGCTGAGGTGGCGTCTTTTTGGAAAAATAGCGCGCAGATGACTGCCATTACGGTTGATAGGATGATGGGGTATAGACTTGTGTCTAATTTGGGGATTGTTAAGTGGGTGTTTTCAGAGACCAATGTTGAGCTTTTTCATACTTCCGATCGTTTGTGGGAGATTCTAAGAAACGCGCTTAACAAAACATACAACCGGATTACGGATTTAAGAAAGGAAATTCTTAACCTAAAAAAAAACGTTGCAAAAGCGGAACAAATTGCAGCAAAGGCAAAAGCTGAGCTGGACGAGGCTGAAACAAAGCTCATGCTTGTAGATGGTGAACCCGTGGTTGGTGAAAACCCTGCAAGAATGAAACGTTTGAAATCAAATGCTGCAAACACTAAAGATGATGAGGTGGCAGTTCGTGAGTCCCTAGAGTCTAAACAAGCTCTTTTTGCACGTGCCCTTGAAGAAAATCAGGCGTTATTCATGTCATTATACAAAAACTTCTCAAATGTTTTAATGGAAAGACTTGACGACACATTTGGAGAAAAAACCAGTGAGCATGAATCAATGGCTGTTGATGATGATGATAATAATGATAATGAAGACAATCCATCAATGGATACCGATAAAGAAAACGGAAATTCAAAAAGATATACTACAAGTGAGAAACAACAATGGTGTTTGTCAACTTTGGGTTATGTCAAGGCCTTTTCAAGACAATATGCATCCGAGGTTTGTCATTATTTTTCAATTAAGTCCCTCAACTTTGAGTAA | 1533 | 42.47 | MDASRKECAACMVGLPVPFRYEYLMAETIFSQLLLLPEPPFKPMYYTLVIIDLCKSLPGAFPAVVAGAVRALFDRISELDMECRTRLILWFSHHLSNFQFIWPWDEWAYVLELPKWAPQRVFVQEVLDREVRLSYWDKVKQSIESTPALEELLPPKGGPDFRYTPDQNQEDTNNKTEHTLSTELNSMVKSRKTSRDIITWLEESVIPNNSLQLALRVTIQTLLDIGSKSFTHLITVLERYGQVIARVCPDEETQGVLIAEVASFWKNSAQMTAITVDRMMGYRLVSNLGIVKWVFSETNVELFHTSDRLWEILRNALNKTYNRITDLRKEILNLKKNVAKAEQIAAKAKAELDEAETKLMLVDGEPVVGENPARMKRLKSNAANTKDDEVAVRESLESKQALFARALEENQALFMSLYKNFSNVLMERLDDTFGEKTSEHESMAVDDDDNNDNEDNPSMDTDKENGNSKRYTTSEKQQWCLSTLGYVKAFSRQYASEVCHYFSIKSLNFE | 510 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tako4g03043 | 510 | MobiDBLite | consensus disorder prediction | 150 | 175 | - | - | |
| Tako4g03043 | 510 | Coils | Coil | 317 | 365 | - | - | |
| Tako4g03043 | 510 | SUPERFAMILY | ARM repeat | 154 | 502 | IPR016024 | - | |
| Tako4g03043 | 510 | Gene3D | - | 169 | 507 | - | - | |
| Tako4g03043 | 510 | PANTHER | CAP BINDING PROTEIN | 4 | 502 | IPR027159 | GO:0000184(PANTHER)|GO:0000339(PANTHER)|GO:0000339(InterPro)|GO:0003729(PANTHER)|GO:0005634(PANTHER)|GO:0005845(PANTHER)|GO:0005846(InterPro)|GO:0005846(PANTHER)|GO:0006406(InterPro) | |
| Tako4g03043 | 510 | Gene3D | - | 1 | 157 | - | - | |
| Tako4g03043 | 510 | Pfam | MIF4G like | 178 | 497 | IPR015174 | GO:0016070(InterPro) | |
| Tako4g03043 | 510 | Pfam | MIF4G like | 19 | 143 | IPR015172 | GO:0016070(InterPro) | |
| Tako4g03043 | 510 | SUPERFAMILY | ARM repeat | 3 | 154 | IPR016024 | - | |
| Tako4g03043 | 510 | FunFam | Nuclear cap-binding protein | 1 | 157 | - | - | |
| Tako4g03043 | 510 | MobiDBLite | consensus disorder prediction | 436 | 472 | - | - | |
| Tako4g03043 | 510 | MobiDBLite | consensus disorder prediction | 456 | 470 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tako4g03043 | K12882 | nuclear cap-binding protein subunit 1 |