AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tako4g03277 ATGGTGTTACATGAGGAGAGTAATTCGTATTATTACTGGAACACTTTGACTGGTCAAACTTCTTGGGAAGTCCCTGTTGACTTTGTTGACCTGGTTCAAGGAAACGGACCAGAACCAAAACCACAACCAGTCTATGATCCTCAATCGGTCACAGTAGTTGAAGAAATGCATGTTGATACACAACCGAATGATAGGTCCACTGAATCTTTGCCTTTTGAGGCCATGGAAAATGACGGTTATAGGTCTGAATCAGATATCAAGTCACATGATGGGGTCAAGGGTGATTATGTCAATACAACAGATGCTTTGAGTAATGGGGAAGGGGAAGCCCAATATTCTGATTCTTATCGGCTTTTGGAAATTGGTGAAAGTTTATTAGAAAGATTAAAATCATTGAAAGTGGAAAGTCAACAGAAGTCAAAGTTAATGATTGAGCTTGATATAAGACTTGCAGACATTAAGTCATTAGTATGTTACGGATCGTCTTTGCTTCCGTTCTGGCTGCATTCTGAAAACCATTTGAGAAAACTAGAAACCGCCATCAACAATGAGATTCTAGAACATTCTCAGCTTCCAATTAATGGCGAAACAGTTGAAAAGGCAGACAATAAGATACAAGAAAAAGAAAAAGAAAAAGAAAAGGAAGTTATAGTAGATGCAGATGCAGATGATAACATGGATGTTGAAATGGAGGTTGAAGATGATCATGATGATGACTCACTAGTCCAAAACGGGCCCCACTATGAAAAAGAAGAAGGAGAAATCGAGGTACCAATACCACCTCCACCTAATGATGAGTGGGTCCCACCACCACCACCACCACCACCGGATGATGAACAGCCGCCTCCACCGCCGCCAGGTGACACCACATTCGTTCCACCACCACAGGCTGCCGGCTACACATATGGAGAAGAATATAATTTTGCATATGCGGGACCCAATATCGACTACTATGGTCAACAAGTCCAAAATCATGAGTATTATGTAGATGCTACTGGATGCCAGCTGGCGGCCACAGCTGCTCCAATCCCTACTCTTTATTATACAACAGTGCAGAATCCGTATCCAGATGAGTGGGTCCCACCTCCATTACCAACTAGTACTACTTCTACTGTGACTGCTCCAACAGAACCAGTTCCTAAGGTTCAACCTAAAGTCGCAAGAAACAAAAAACGTACGGTTGCTACAGTGCCTGGTTTAAGGTCTAACAAGAAAGTTTCATGCTTGGTGGATAAGTGGAAGGCTGTTAAAGAGGAATTGCATGAAGATGAGGAAGATGATGAACCTGAAAATGCTTTAGAATTTTTAGAGAAGAAAAAGAAACGGGAGATTGAGCAATGGCATGCACAGCAGATTGCAACTGGAGAAGCCAAAGACAATGCTAATTTTCAACCTCTTGGTGGTGATTGGAGGGAGAGAGTTAGAAGGAAGAGAGCTAAAAAGTCAACTGAAGCTGAAGAACATCAAACCAATCCCAAGGGCATTGATGTCATTAACCAAAAGCCTGATCTTGTACAACTAACAAAACAACTCCCATCTGGTTGGCAGGCATATTGGGATGAAGCATCAAAGCAGGTTTATTATGGGAACTCAAAAACATCAGAAACTTCATGGACTAAACCTAAAGTTTAA 1632 41.67 MVLHEESNSYYYWNTLTGQTSWEVPVDFVDLVQGNGPEPKPQPVYDPQSVTVVEEMHVDTQPNDRSTESLPFEAMENDGYRSESDIKSHDGVKGDYVNTTDALSNGEGEAQYSDSYRLLEIGESLLERLKSLKVESQQKSKLMIELDIRLADIKSLVCYGSSLLPFWLHSENHLRKLETAINNEILEHSQLPINGETVEKADNKIQEKEKEKEKEVIVDADADDNMDVEMEVEDDHDDDSLVQNGPHYEKEEGEIEVPIPPPPNDEWVPPPPPPPPDDEQPPPPPPGDTTFVPPPQAAGYTYGEEYNFAYAGPNIDYYGQQVQNHEYYVDATGCQLAATAAPIPTLYYTTVQNPYPDEWVPPPLPTSTTSTVTAPTEPVPKVQPKVARNKKRTVATVPGLRSNKKVSCLVDKWKAVKEELHEDEEDDEPENALEFLEKKKKREIEQWHAQQIATGEAKDNANFQPLGGDWRERVRRKRAKKSTEAEEHQTNPKGIDVINQKPDLVQLTKQLPSGWQAYWDEASKQVYYGNSKTSETSWTKPKV 543
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tako4g03277 543 MobiDBLite consensus disorder prediction 200 221 - -
Tako4g03277 543 SUPERFAMILY WW domain 5 27 IPR036020 GO:0005515(InterPro)
Tako4g03277 543 CDD WW 512 541 IPR001202 GO:0005515(InterPro)
Tako4g03277 543 Gene3D - 2 33 - -
Tako4g03277 543 SMART ww-5 1 27 IPR001202 GO:0005515(InterPro)
Tako4g03277 543 SMART ww-5 510 543 IPR001202 GO:0005515(InterPro)
Tako4g03277 543 MobiDBLite consensus disorder prediction 459 499 - -
Tako4g03277 543 ProSitePatterns WW-rsp5-WWP domain signature. 515 541 IPR001202 GO:0005515(InterPro)
Tako4g03277 543 Pfam WW domain 511 541 IPR001202 GO:0005515(InterPro)
Tako4g03277 543 Coils Coil 198 218 - -
Tako4g03277 543 PANTHER OS06G0298400 PROTEIN 82 209 - -
Tako4g03277 543 Gene3D - 506 543 - -
Tako4g03277 543 MobiDBLite consensus disorder prediction 469 491 - -
Tako4g03277 543 MobiDBLite consensus disorder prediction 222 238 - -
Tako4g03277 543 MobiDBLite consensus disorder prediction 239 256 - -
Tako4g03277 543 MobiDBLite consensus disorder prediction 197 299 - -
Tako4g03277 543 SUPERFAMILY WW domain 506 541 IPR036020 GO:0005515(InterPro)
Tako4g03277 543 ProSiteProfiles WW-rsp5-WWP domain profile. 509 543 IPR001202 GO:0005515(InterPro)
Tako4g03277 543 Coils Coil 471 491 - -
Tako4g03277 543 MobiDBLite consensus disorder prediction 257 292 - -
Tako4g03277 543 SUPERFAMILY Formin homology 2 domain (FH2 domain) 271 420 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tako4g03277 K24774 formin-binding protein 4