Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tako4g03298	ATGCCAAAAACTCCGCTTTGGGACTTGCCGGAGCTGCCCAAAAACGAGCTTCCACTTCACCTCCAACTCCAGAAGACTCGCGTCTTCTGCAATAACGATGCTCCCACTCATACAGAGAATATACACTATTCTGGTGCATATGCAGCAATGGGAGTCGATAACAGCTTAAGGTTGGACGAATTCAGGAAAAACTTCAAAGTTAAGATCATTAAGCTCAATGAAGAAGATATGGAGTTTGATTTGATTGGAATTGATGCTTCTATCGCCAATGCTTTTAGAAGAATCCTCATCTCTGAGGTACCTACTATGGCAATCGAGAAGGTTCTTGTTGCAAACAGTTCATCAGTAGTACAAGATGAAGTACTTGCTCACAGACTTGGTCTAATTCCTATAATAGTCGACCCAAGGCTGTTTGATTATATGTCAGAAAACGATATACCTAATGAGAAAAACTCCATTGTCTTCAAACTCCATGTGAAGAATAAGCGAGGATCCGGTGAACGGCGCACAGTGTTCTCTCATGATCTTCAGTGGCTGCCATTTGGTAGTGAATATGCTTTGCCAACTGAAAATCCTTCAGATCCAAATTCAAATACAAAACCAAAAACATACACATCATATACTTTCAGTCAGGATACATTGCCTGAATTTTCCAGTAATCCTATCACTGTCACTCCTGGTATCATCATATCAAAACTTGGACCTGGACAGGAGATTGAGTTAGAAGCACATGCATGTAAAGGACTTGGTAAAACACATGCTAAATGGTCTCCTGTAGCTACTGCTTGGTATAGAATGCTCCCTGAGGTTATATTGTTGCAAGATATTGAGGATGAGGATGCTGAGGAACTTGTAAAGAAATGCCCAGTCAATGTGTTTGACATTGAGGATATCGGTAAAGGTAGGAAATGGGCAACTGTGGCAAGACCAAGGGCTTGCACCTTGTGTAGGGAATGCATTAGGGAGCCTGGATGGGAGGAGAAGGTGGCACTTAGACGTGTCAAAGATCATTTTATCTTCACTATAGAATCGACTGGAGCATTGCCACCTGAGGTGCTATTCACTGAAGCGGTTAAGATCTTGGAAGATAAATGCGAACGTCTGATTACTGAGATGTCATAG	1122	41.98	MPKTPLWDLPELPKNELPLHLQLQKTRVFCNNDAPTHTENIHYSGAYAAMGVDNSLRLDEFRKNFKVKIIKLNEEDMEFDLIGIDASIANAFRRILISEVPTMAIEKVLVANSSSVVQDEVLAHRLGLIPIIVDPRLFDYMSENDIPNEKNSIVFKLHVKNKRGSGERRTVFSHDLQWLPFGSEYALPTENPSDPNSNTKPKTYTSYTFSQDTLPEFSSNPITVTPGIIISKLGPGQEIELEAHACKGLGKTHAKWSPVATAWYRMLPEVILLQDIEDEDAEELVKKCPVNVFDIEDIGKGRKWATVARPRACTLCRECIREPGWEEKVALRRVKDHFIFTIESTGALPPEVLFTEAVKILEDKCERLITEMS	373

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tako4g03298	373	PANTHER	DNA-DIRECTED RNA POLYMERASE	23	372	IPR050518	GO:0001054(PANTHER)\|GO:0001056(PANTHER)\|GO:0003899(PANTHER)\|GO:0005666(PANTHER)\|GO:0005736(PANTHER)
	Tako4g03298	373	SMART	rpoldneu2	76	371	IPR011263	GO:0003899(InterPro)\|GO:0006351(InterPro)
	Tako4g03298	373	Pfam	RNA polymerase Rpb3-Rpb11 dimerisation domain	78	365	IPR011263	GO:0003899(InterPro)\|GO:0006351(InterPro)
	Tako4g03298	373	SUPERFAMILY	RBP11-like subunits of RNA polymerase	63	371	IPR036603	GO:0006351(InterPro)\|GO:0046983(InterPro)
	Tako4g03298	373	CDD	RNAP-I-II-AC40	65	371	IPR033901	GO:0001054(InterPro)\|GO:0001056(InterPro)
	Tako4g03298	373	Gene3D	-	102	254	IPR036643	-
	Tako4g03298	373	Pfam	RNA polymerase Rpb3-RpoA insert domain	122	255	IPR011262	GO:0003899(InterPro)\|GO:0006351(InterPro)\|GO:0046983(InterPro)
	Tako4g03298	373	Gene3D	-	67	364	IPR036603	GO:0006351(InterPro)\|GO:0046983(InterPro)
	Tako4g03298	373	SUPERFAMILY	Insert subdomain of RNA polymerase alpha subunit	101	195	IPR036643	-
	Tako4g03298	373	Hamap	DNA-directed RNA polymerase subunit Rpo3 [rpo3].	66	372	IPR022842	GO:0003899(InterPro)\|GO:0006351(InterPro)
	Tako4g03298	373	SUPERFAMILY	Insert subdomain of RNA polymerase alpha subunit	190	258	IPR036643	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tako4g03298	K03027	DNA-directed RNA polymerases I and III subunit RPAC1