AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tako4g03307 ATGAAGCAACATTGGATGGTTAGGGCGCTCTCGAAAACGCTAATTACCCTGTTTCCAGTTTCCTCTCGTTCTTCTCGTGCTTGTTTCTCCAATTCTTCTAGTTTTGCTATTAAAAATGTCACGAAATCCAACTTTGATTCGTCTCTCGCTGACCTTCGGCGTCACGTCCGAGACTCTGATTTTGTGGCAATTGACCTGGAAATGACGGGAGTCACGAGCGCTCCTTGGAGGGAATCGTTTGAGTTTGATAGATACGACGTTCGTTATCTTAAGGTGAAGGACTCCGCTGAAAAGTTTGCTGTTGTTCAATTTGGAGTTTGTACCTTCCGATGGGACACAACCAAACACTCCTTCATTGCCCACCCGCACAACTTTTACATATTTCCAAGGCAAGAAGTTGGAGGTGATGCCAGATCTTATGAGTTCCTGTGCCAGACTTCCTCAATTGATTTCCTGGCGAAGTACCAGTTTGATTTCAATTTGTGTGTAAAAGAAGGAATATCTTATTTATCCAGAGCACAAGAAGATGAAGCTAGATCGCAATTACATTCAGCACATGAAGATGAATTATCAGAGTCACCATATGTAACTAAAGAAATTAAAGATGTTCCACTTGTCAGAATTGCAGATATTCTTTTTGTGGAGAGAATGAAGAACAAAATCAATGAATGGCATGATGACTTGTTACAGATGAAAAAAGGAGGGTCCAGCAGAATTTCCGAAGATTCTAATGGCTCAATTGATCAGTTTGAGACCATCTTTTTTAGGATGCGTCCAGCCATCAAACTTAATGGATTTACTTCCCGCCAACTAAGGTTGATTAAGTCGGTTGTAGAAAAGAGCTTCAAGGATTTAGCTTACATCCATGCTAATGGTGATTCATGCTCTCAACAAATTATTGTCTACATAGACTCCAGAAGAGACCTAGAGTTGCTTATGAAAGAAGTAAAAGAAAGCAATCATAAGGAATCAGAGAAGAAAATTGGAGCTGCAATTGGCTTCCGCCATGTCATTGACCTTCTTTCCTCTGCGCAAAAATTAATTGTTGGACACAATTGCTTTCTTGATATTGCACATGTATGTAAAAAGTTCTTAGGTCCACTTCCTTCAAATCTTGAAGAATATGTAACCCTAATTAAAAATAACTTCCCATACATAATCGATACAAAGATCCTTCTGAATGCAAGTAATGTTTTGCAATTAAAGATGAAGAAAAGCAGCACATCACTCCCTAAAGCTTTTGCCATTATGTGTCCACATATTGCTTCTCCTGGATTGGCTCATACCTCTTCTGTTGCATTTGAGGTTCAAGTTTATGATATGAGATCAACAAACTGGAACTCAGGAGCTAAACATGAAGCCGGTTATGATGCTTTCATGACAGGCTGTATTTTTGCCCAATCGTGCAAACATCTCCAAATTGACTTGTCCACTTGTCCTAATCCTAATTTAATTAAAGAAAACAACCTCCAAAACTACCTAAACCTTCTTTACCTGAGTTGGACTAGCGGTGACATAGTTGACTTAAAAACCGGTCAAACCACAACAGAGTCTTCAAGATTCAACACCTTCAAAACCTTCAAGACCCAACAACCAAAGATCCCGTTTCAAAACATTGCCATAGTTTGGGGGTTCCAATTGAAACTTAATGCAAGGGCAATAAAGGAAATTCTGTGTAAAGTGTTTGGGTTGACTTCGGTTACATCGGTGTTCCATTTGGATAAGACGGCTGTGTTTATTCAGTTTAGTAAACCGGAACTGGTTTCTGAGTTTTTGGAACTGAAATTGAGCATAGAGAAGAAGAAGAAGAATGATGCAATTTACGTTTTGCACCCTCTTTCCGAGCTTCTAGAAGGTGGGAGGACGGGGGTTGGGTGTTATGAGGTTTATAAACAGATTTGTGGGTCGTGTGTTTCAAAAGTGTTGTTTGCTGATCAAGCGGAAGCTATTGGTGTCGGGTTTCAGAACAGTTTGTTACAAAAGGTTCAAGAAAATGGGGATTTTGATTATAACGTGTGTTTAGATGATACTAATAAACAACAAATAAGTTTGTGA 2055 39.32 MKQHWMVRALSKTLITLFPVSSRSSRACFSNSSSFAIKNVTKSNFDSSLADLRRHVRDSDFVAIDLEMTGVTSAPWRESFEFDRYDVRYLKVKDSAEKFAVVQFGVCTFRWDTTKHSFIAHPHNFYIFPRQEVGGDARSYEFLCQTSSIDFLAKYQFDFNLCVKEGISYLSRAQEDEARSQLHSAHEDELSESPYVTKEIKDVPLVRIADILFVERMKNKINEWHDDLLQMKKGGSSRISEDSNGSIDQFETIFFRMRPAIKLNGFTSRQLRLIKSVVEKSFKDLAYIHANGDSCSQQIIVYIDSRRDLELLMKEVKESNHKESEKKIGAAIGFRHVIDLLSSAQKLIVGHNCFLDIAHVCKKFLGPLPSNLEEYVTLIKNNFPYIIDTKILLNASNVLQLKMKKSSTSLPKAFAIMCPHIASPGLAHTSSVAFEVQVYDMRSTNWNSGAKHEAGYDAFMTGCIFAQSCKHLQIDLSTCPNPNLIKENNLQNYLNLLYLSWTSGDIVDLKTGQTTTESSRFNTFKTFKTQQPKIPFQNIAIVWGFQLKLNARAIKEILCKVFGLTSVTSVFHLDKTAVFIQFSKPELVSEFLELKLSIEKKKKNDAIYVLHPLSELLEGGRTGVGCYEVYKQICGSCVSKVLFADQAEAIGVGFQNSLLQKVQENGDFDYNVCLDDTNKQQISL 684
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tako4g03307 684 PANTHER POLY A -SPECIFIC RIBONUCLEASE-TARGET OF EGR1, MEMBER 1 37 649 IPR051181 GO:0000175(PANTHER)|GO:0003723(PANTHER)|GO:0005737(PANTHER)
Tako4g03307 684 SUPERFAMILY Ribonuclease H-like 37 475 IPR012337 -
Tako4g03307 684 Gene3D - 39 206 IPR036397 GO:0003676(InterPro)
Tako4g03307 684 Gene3D - 240 513 IPR036397 GO:0003676(InterPro)
Tako4g03307 684 Pfam CAF1 family ribonuclease 40 465 IPR006941 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tako4g03307 K01148 poly(A)-specific ribonuclease [EC:3.1.13.4]