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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tako4g03314 ATGGCATCCTCTGTATTTTCTACACATGGCACCACACGATTTCCTGAAGGAAGGAACATCTTTGGTGATTCAAATAAGTCAAATCTCTTCCATTACAAGAAAAACCATTCACCAGCTACCTTAACACACTCAAGTCTGTTATCCAAAAACAGAATCCAATGTAGGGCAATAGAGGTCCAAACCAACCACACCTTCTTAAAGGGAGACAAATTTCAACTTGAAGATGTGATTGAGGCACAACAATTTGACAGAGATACCCTCAGTGCTATTTTCAAAGTAGCACGTGAAATGGAAACAATCGAGAAAAACTCACATGGAAGCCAGCTTTTAAACGGTTATTTAATGGCTACACTTTTCTACGAGCCTTCAACAAGAACTAGGCTTTCATTTGAGTCAGCAATGAAGCGTTTAGGTGGCGAAGTCTTGACCACAGAAAATGCACGCGAGTTCTCTTCTGCTGCAAAAGGAGAAACACTTGAAGATTCTATTAGAACAGTGGAAGGGTATTCGGATATAATAGTAATGAGGCATTTTGAAAGCGGAGCAGCAAGAAGAGCAGCAATGACAGCCAACATTCCTGTTATCAATGCCGGAGATGGTCCAGGTCAGCATCCAACTCAGGCACTTCTCGACATGTACACAATTGAAAGAGAGATAGGGAAACTGGATGGAATCAAAGTGGGACTTGTTGGTGACCTGGCAAACGGAAGAACAGTGAGGTCTCTTGCATATCTTCTAGCCAAATATGATAATGTGAAAGTGTATTTTGTGTCGCCACAAGTGGTGAAAATGAAGGAGGATATTAAGGAGTATCTGACAATGAAAGGGGTAAAATGGGAAGAAAGTGTGGATTTAAAGGAAGTGGCATCGGAATGTGATGTGGTGTACCAGACACGTATACAGAAGGAACGTTTTGGAGAGAGGAGTGATCTATATGAAGAAGCACGTGGGAAGTATATAATTGATGGGGAGGTGTTGGGTGTGATGCAGGAACATGCTATTGTTATGCATCCTCTCCCACGTCTTGATGAGATAAGGGTGGAAGTGGATGGGGACCCGCGAGCGGCTTATTTCAGACAGGCTAAGAATGGGCTTTATATAAGAATGGCTTTGTTGAAGCTTTTGCTTATTGGTTGGTGA 1140 42.28 MASSVFSTHGTTRFPEGRNIFGDSNKSNLFHYKKNHSPATLTHSSLLSKNRIQCRAIEVQTNHTFLKGDKFQLEDVIEAQQFDRDTLSAIFKVAREMETIEKNSHGSQLLNGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSSAAKGETLEDSIRTVEGYSDIIVMRHFESGAARRAAMTANIPVINAGDGPGQHPTQALLDMYTIEREIGKLDGIKVGLVGDLANGRTVRSLAYLLAKYDNVKVYFVSPQVVKMKEDIKEYLTMKGVKWEESVDLKEVASECDVVYQTRIQKERFGERSDLYEEARGKYIIDGEVLGVMQEHAIVMHPLPRLDEIRVEVDGDPRAAYFRQAKNGLYIRMALLKLLLIGW 379
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tako4g03314 379 PRINTS Aspartate carbamoyltransferase signature 295 304 - -
Tako4g03314 379 PRINTS Aspartate carbamoyltransferase signature 149 158 - -
Tako4g03314 379 PRINTS Aspartate carbamoyltransferase signature 109 131 - -
Tako4g03314 379 PRINTS Aspartate carbamoyltransferase signature 357 371 - -
Tako4g03314 379 PRINTS Aspartate carbamoyltransferase signature 203 220 - -
Tako4g03314 379 PRINTS Aspartate carbamoyltransferase signature 335 340 - -
Tako4g03314 379 Gene3D Aspartate-ornithine carbamoyltransferase 204 363 IPR036901 GO:0006520(InterPro)|GO:0016597(InterPro)|GO:0016743(InterPro)
Tako4g03314 379 FunFam Aspartate carbamoyltransferase 2 208 363 - -
Tako4g03314 379 ProSitePatterns Aspartate and ornithine carbamoyltransferases signature. 119 126 IPR006130 GO:0006520(InterPro)|GO:0016597(InterPro)|GO:0016743(InterPro)
Tako4g03314 379 SUPERFAMILY Aspartate-ornithine carbamoyltransferase 71 376 IPR036901 GO:0006520(InterPro)|GO:0016597(InterPro)|GO:0016743(InterPro)
Tako4g03314 379 PRINTS Aspartate-ornithine carbamoyltransferase superfamily signature 119 138 IPR006130 GO:0006520(InterPro)|GO:0016597(InterPro)|GO:0016743(InterPro)
Tako4g03314 379 PRINTS Aspartate-ornithine carbamoyltransferase superfamily signature 204 215 IPR006130 GO:0006520(InterPro)|GO:0016597(InterPro)|GO:0016743(InterPro)
Tako4g03314 379 PRINTS Aspartate-ornithine carbamoyltransferase superfamily signature 331 340 IPR006130 GO:0006520(InterPro)|GO:0016597(InterPro)|GO:0016743(InterPro)
Tako4g03314 379 PRINTS Aspartate-ornithine carbamoyltransferase superfamily signature 341 364 IPR006130 GO:0006520(InterPro)|GO:0016597(InterPro)|GO:0016743(InterPro)
Tako4g03314 379 PANTHER ORNITHINE CARBAMOYLTRANSFERASE, MITOCHONDRIAL 69 376 - -
Tako4g03314 379 Gene3D Aspartate-ornithine carbamoyltransferase 76 372 IPR036901 GO:0006520(InterPro)|GO:0016597(InterPro)|GO:0016743(InterPro)
Tako4g03314 379 Hamap Aspartate carbamoyltransferase [pyrB]. 73 378 IPR002082 GO:0004070(InterPro)|GO:0006207(InterPro)
Tako4g03314 379 FunFam Aspartate carbamoyltransferase 75 207 - -
Tako4g03314 379 NCBIfam aspartate carbamoyltransferase 75 376 IPR002082 GO:0004070(InterPro)|GO:0006207(InterPro)
Tako4g03314 379 Pfam Aspartate-ornithine carbamoyltransferase, carbamoyl-P binding domain 75 216 IPR006132 GO:0006520(InterPro)|GO:0016743(InterPro)
Tako4g03314 379 Pfam Aspartate-ornithine carbamoyltransferase, Asp-Orn binding domain 223 374 IPR006131 GO:0006520(InterPro)|GO:0016597(InterPro)|GO:0016743(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tako4g03314 K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]