AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tako4g03511 ATGATGAACCCGGTCAACCAAGAAGCAAGACCCGAAGCTTCACTAATCATTCCCGAAAAACGAAAACGAGGCCGTCCACGAAAAGACCCGAGCGAAAGACGGGCAGCAAAAGCCGCCCGTGCACAAGCTGCCCGAATGAACCCCGGTCTCACCCACCACCACCACCCTACCCCCACCGCCACCCGTCCCGACCCAATCCACGACCCGACCCAAGTCATGATCGGTCAAACCATAACCGGTGTAGTCGAGGCGACCTTCGATGCCGGTTACCTTCTCGCAGTCAGAATCGGTAACTCAAACATAACCCTAAGAGGCGCGGTGTTCAAGCCAGGTCACACCGCTCCAGTCACACCCGAGAATGACGTGGCGCCACATGTCGAAATGATCAAGCGGGCCCACGTCCCATTTCCCGAAACCCAACCGGTAGTCCGCAGGCGGAAAAGAAGATCAAAAGAGAAAAACATGCAGCTTGTTACTTACGTCCCGAACGGGTCCCACGACCAGGTACAACCACAACAAAATTACGTTTTTACCCCTTCTGTTTCGGCTAGAGGGAATGTTATCCCGGTTGTTCTACCAAACGGGCCGACAACATCGCCATCGATGACTCAACCGCCACCTCATATGCGGGCCACACAAGGGAAACCGGTCCACTCGGTTTTGCCTTTGGCGGTTTACCCGCCAAATGGGTCAACAAGTCAAGCTTCTGAGTCACAGACGAGTTCGCAGTTTACACCTACAGGGTCTGGGAATGAGAATGTTTCGGTCAAACAAGGCGGGGTGGATGGTCAACAGGCGGAAGGTGGCGGTGGTGGTGGTGGTAGTAAGTCAACTGTTGTGAAAACAGAAACGGATATTGGGGATATGAACGAGCCGCTTTTTGTTGAACCGTTGCAGACTCGACACACGGTTCACCATTTTCAGAATGCGGGGCCCGCGATGGGACCTGGGATGCATACGGGAACTGGGAGAATGACAGAACTTTTACAGGCTGTTCAACAGAATATGGGAGACGACCAAACCCCACGAAACGGCCCTCAAACTGCTAATTTTATGGAAACGGATGGAGGAAAGATGTAA 1080 53.33 MMNPVNQEARPEASLIIPEKRKRGRPRKDPSERRAAKAARAQAARMNPGLTHHHHPTPTATRPDPIHDPTQVMIGQTITGVVEATFDAGYLLAVRIGNSNITLRGAVFKPGHTAPVTPENDVAPHVEMIKRAHVPFPETQPVVRRRKRRSKEKNMQLVTYVPNGSHDQVQPQQNYVFTPSVSARGNVIPVVLPNGPTTSPSMTQPPPHMRATQGKPVHSVLPLAVYPPNGSTSQASESQTSSQFTPTGSGNENVSVKQGGVDGQQAEGGGGGGGSKSTVVKTETDIGDMNEPLFVEPLQTRHTVHHFQNAGPAMGPGMHTGTGRMTELLQAVQQNMGDDQTPRNGPQTANFMETDGGKM 359
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tako4g03511 359 PANTHER AT HOOK MOTIF-CONTAINING PROTEIN 2 350 IPR045881 -
Tako4g03511 359 MobiDBLite consensus disorder prediction 194 279 - -
Tako4g03511 359 MobiDBLite consensus disorder prediction 194 208 - -
Tako4g03511 359 MobiDBLite consensus disorder prediction 336 359 - -
Tako4g03511 359 MobiDBLite consensus disorder prediction 226 260 - -
Tako4g03511 359 MobiDBLite consensus disorder prediction 1 66 - -
Tako4g03511 359 MobiDBLite consensus disorder prediction 336 351 - -
Tako4g03511 359 MobiDBLite consensus disorder prediction 14 39 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tako4g03511 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
5307228 Tako Tako3g04581 Tako-Chr3:124286425 Tako4g03511 Tako-Chr4:77620334
5307229 Tako Tako3g04582 Tako-Chr3:124286425 Tako4g03511 Tako-Chr4:77620334
5341247 Tako Tako4g03511 Tako-Chr4:77620334 Tako3g04558 Tako-Chr3:124004393