AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tako4g03585 ATGGAGGACGTATTCGTTGCCATCGTTTCGATGCTTCTCATTGTTGCTTTAATTCCACTTTACCTATGGCGACGACGTCAGGTCCCGCAGTCTCACGAAGAAGAACCACAGATTCAGCAGAGGGAAACTGTTGTGCGACCTGCTGGTGCTCGTAGCAGGATGCGTAGAAGGAATAATACTTCTGCCGCTAGCACATCTTCCGCACCACCACAAGTTGTAGAAGAAACTGAAGACGGCAGTGATGAGGAAGCTGTTGAAGGTGAATATTACAATGCAAAAGCATCAAAGAAGAAAGGAAGGAAGAAAGAAGAACGCCAAGCACAACGTCAGGCTGAAGAGGCAGCAAGGGAGTCAAGGAACACAAAACAAGATCGTTATGCAGAAATTCGAAGGAGGAAAGATGAGGAACATGAAGCAAGAGAGCGTATGCTGGAAGAAGAAGCTGAGGCTAGAAAGGCTAAGGAGGAGGAAGCTGCAGCATTAGAGTTTGAGAAATGGAAAGGAGAATTTTCAGTAGATGCTGAAGGTACTAATGAAAATGAAGTTCAAGATGGAACCCAGGGACTGCTTTTTGATTTTGTGGAGTATATCAAGAAACATAAATGTGTTCCATTGGAAGACCTTGCTGCAGAATTCAAACTACGCACACAGGACTGTATCAACCGCATCACCTCACTAGAAGACATGGGGAGGTTATCTGGGGTAATGGACGATAGAGGAAAATACATATACATTTCCCATGAAGAAATGAAGGCGGTTGCGGATTATATAAAACGTGAAGGTAGGGTCAACATTGCACATCTGGCAAGTCAATCTAATCAGTTTATAGATTTGGAACCAAAAACGCCTTTTGTAGAAGATCTAGCAATTCAAGATAAAATTACAGTTGCTTGA 894 43.29 MEDVFVAIVSMLLIVALIPLYLWRRRQVPQSHEEEPQIQQRETVVRPAGARSRMRRRNNTSAASTSSAPPQVVEETEDGSDEEAVEGEYYNAKASKKKGRKKEERQAQRQAEEAARESRNTKQDRYAEIRRRKDEEHEARERMLEEEAEARKAKEEEAAALEFEKWKGEFSVDAEGTNENEVQDGTQGLLFDFVEYIKKHKCVPLEDLAAEFKLRTQDCINRITSLEDMGRLSGVMDDRGKYIYISHEEMKAVADYIKREGRVNIAHLASQSNQFIDLEPKTPFVEDLAIQDKITVA 297
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tako4g03585 297 PANTHER DDRGK DOMAIN-CONTAINING PROTEIN 1 29 287 IPR050899 -
Tako4g03585 297 MobiDBLite consensus disorder prediction 104 155 - -
Tako4g03585 297 MobiDBLite consensus disorder prediction 30 155 - -
Tako4g03585 297 Coils Coil 97 124 - -
Tako4g03585 297 Coils Coil 126 164 - -
Tako4g03585 297 SUPERFAMILY Winged helix DNA-binding domain 184 253 IPR036390 -
Tako4g03585 297 Gene3D - 188 245 IPR036388 -
Tako4g03585 297 SMART DDRGK-2 92 277 IPR019153 -
Tako4g03585 297 FunFam DDRGK domain-containing protein 1 188 245 - -
Tako4g03585 297 Pfam DDRGK domain 92 277 IPR019153 -
Tako4g03585 297 MobiDBLite consensus disorder prediction 54 73 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tako4g03585 K23344 DDRGK domain-containing protein 1
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
5331737 Tako Tako4g03585 Tako-Chr4:79145822 Tako4g03586 Tako-Chr4:79145822