AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tako4g03638 ATGCGGATGAAAAACAGGAACAAAAGTTCACTAGAATTACCTCAGAAACTCTCTGCTGACTCCATTCCTCAACAACCAAATTCTTATGAAGGTGAAAGTCTCCTCCATCTTGTCAACTCAATTCAAAGAGAAATCAAGTCAGTTAGGGTTTCAGATGAATCTTTACCTTATAAAATTTGGCTTAAGCAACAATTTTCAATTGGTGTCAATGATGTGACACGTGTACTTGAACGGATGCCACCTGTTCATGGATCTATAACCTCTCTTAATGTAAAAGCATCTTCCCTCCAAATGCAGGCGATACTTATAGCAACGGATTGTAATCCTCGGTCTCTTACAAAGCACCTACCGATCTTGGCATCTTCTAGGGGCGTTTCGGTCATTTTTGTGAAAGATAAGAAAGGGGGATCTTTCAAATTAGGTGAAATTGTGAATCTTAAAACGGCTATGGCAATTGGAATTAAGGCTAGAGGAAATACAATTAACAAAGTTATAGACGAGTTTTTGGGAGATAATGAGGTAAAAAGCAACATTTTGGGGCCATAA 546 38.28 MRMKNRNKSSLELPQKLSADSIPQQPNSYEGESLLHLVNSIQREIKSVRVSDESLPYKIWLKQQFSIGVNDVTRVLERMPPVHGSITSLNVKASSLQMQAILIATDCNPRSLTKHLPILASSRGVSVIFVKDKKGGSFKLGEIVNLKTAMAIGIKARGNTINKVIDEFLGDNEVKSNILGP 181
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tako4g03638 181 PANTHER OS07G0636400 PROTEIN 1 175 - -
Tako4g03638 181 MobiDBLite consensus disorder prediction 10 25 - -
Tako4g03638 181 SUPERFAMILY L30e-like 58 167 IPR029064 -
Tako4g03638 181 MobiDBLite consensus disorder prediction 1 25 - -
Tako4g03638 181 Pfam Ribosomal protein L7Ae-L30e-S12e-Gadd45 family 97 157 IPR004038 -
Tako4g03638 181 Gene3D - 41 169 IPR029064 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tako4g03638 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
5311477 Tako Tako4g03621 Tako-Chr4:80450086 Tako4g03638 Tako-Chr4:80934413