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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tako4g03647 ATGCCGGCCTTTAAAAACTCCGTCTTTACCATTCCCTTAACTCGCCCTAAACTAAACCCCTCTCTGATCATCGCTTCCATGGCGATTATACGGCGAAAGTACACACTACTTCTCATACTACTATGTGTTATTCTTCCCTTTTCTCAATCAGAATTGGAATCGGAATCGGAATCGGTAACGGAATCCTCCATCCACGATCTCCTCAAAAGCAAAGGCCTACCGGTTGGCCTGTTCCCGAAAGAAGTTGAATCATTCACTCTCTACGACACAGGGCTTCTTGAAGTGTTCCTGAGAGGACCTTGCTTAACGAAATTCGATACAATGGCTTTCTACGAGAGCACAGTCCGAGCTAACCTTACTTACGGAAGCCTTACCGGCGTTCAAGGTCTGTCGCAGGAAGAGCTTTTCCTCTGGTTACCGGTGAAAGATATCATCGTCGACGATCCGAAATCTGGACTGATACTATTCGACATTGGCTTAGCTCACAAACAGCTGTCTCTCTCACTTTTCGAAGATCCTCCTGACTGCAAATCAGAAGATATTTTAAATTTGAAGAAGAAATCCAGAAAGGAGATAGGATTCGATGCTCAAATGTAG 597 44.72 MPAFKNSVFTIPLTRPKLNPSLIIASMAIIRRKYTLLLILLCVILPFSQSELESESESVTESSIHDLLKSKGLPVGLFPKEVESFTLYDTGLLEVFLRGPCLTKFDTMAFYESTVRANLTYGSLTGVQGLSQEELFLWLPVKDIIVDDPKSGLILFDIGLAHKQLSLSLFEDPPDCKSEDILNLKKKSRKEIGFDAQM 198
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tako4g03647 198 SUPERFAMILY At5g01610-like 33 178 IPR036758 -
Tako4g03647 198 PANTHER T31J12.3 PROTEIN-RELATED 55 177 IPR007493 -
Tako4g03647 198 Pfam Protein of unknown function, DUF538 64 171 IPR007493 -
Tako4g03647 198 Gene3D - 48 181 IPR036758 -
Tako4g03647 198 FunFam Uncharacterized protein At3g07460 50 180 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tako4g03647 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
5302397 Tako Tako2g05856 Tako-Chr2:135773718 Tako4g03647 Tako-Chr4:81079412
5341276 Tako Tako4g03647 Tako-Chr4:81079412 Tako4g00588 Tako-Chr4:7502147