AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tako4g03684 ATGTTCACCAAGTTCATGCTCCGACCACCTTGCTCCGTTTCAATTCCTCTCTCTCCGTCTCTTACACCCTTCTTCTCTAACCCCTGCACCGCCATCTCTATCCGTCGTAGTGCCGTCGTCTCCGCTGCAGCTTCCCTTTCTGTGACCCTCGACGAAACTCTCCCTTACGGACCTTCTTTATCCAAAGGCTACCAACCACCCTCTATAGAAACCAAATCGCCACAGCAAGATACCGAAATCTTTTTCGATGAAACTCGGTTTATTCGTGTTTTCGACATTTCTGCAATTCGGGTCTCCGCCGATCGATGCTACGCCCTCGAAAGCCAACTCCGTGGTCATCTATTGAACTGGCCTCGGATTCGGAACATAGCTAGGGTTCCTGGAGACGAAATTGACGCCGAATTACAAAAGTATTTCAACTCAAATGACGGTGAACATGAACCCTTACAGTTCTTGAATCGGCGAATTTACGGAAAGGCTGAGGGAGATGGGGAGCCGTTGAGCCCAGTATTATACAGAGATAAACTCGCAAAAACTTTTAATTCGAGAGGTTTTGAGAAATTCAGGAATTTGGCCAAGTTGTCGAGGCCAAAGAGGACGACAAAAAAGGAACCGAGTCGAATCAGAGAGAATAAAAGCAACGAGTATTATCTACTAGAGGAGGTTGTGAACATTCATCATGATCCTGAAAACGCGCACGATTTGAGTGGGTTACTTGGAGACGACGAGTACAGGTTAGGGAAATGGAAAGGCTCAACAAGGTTGCTGCTTTTAGATGAGACACATGCCTATAAGTTGTTCGATGAAATGCCTGAAGCAATTAAGGCATGCTTAACGGGATCACCATTTGAACTTGTGAGATGCAAGCTCACTTTGTTTTACAGTTATTGGCAACTGAATGAGATTTTAGAGGCATTGCTTCCCAAGGGTATAATAGTCCCTTCATCTTTTGAGACTGTGGGCCATATCATCCATTTAAACTTGAGGGAAGAACATCTTCCATATAAGAATGTTATCGCAAAAGTTGTTTTGGACAAAAACAAGCCGAAAATACAAACGGTTGTGAATAAGATAGATGCTATTGATAATGAGTTTAGAACCATGGCACTTGAAGTTTTGGCGGGAAACCATTCACTTGTGACAAGAGTAGTGGAAAATGGACTTCATTTTCATGTTGATTTGGCGACTGTATACTGGAGCTCAAAGCTTGCAACAGAGAGACAAAGACTCTTAAATTCTTTCACACGGAGTGATGTTGTTTGTGATGTTTTTGCTGGGGTGGGCCCCTTATCAATATCTGCAGCTAAAAAAGTCAAGTATGTGTATGCAAATGATCTAAACCCTCATGCTGTTGATTATCTTGAAAGAAATTCCGTACTCAACAAACTAGAAAGAAAGATCGAGGTATTTAACATGGATGGGAGAAGATTCATTGATGTTATTTTCAAGAGTCAAAGTTCCCGGCCCATTACACAAGTAGTCATGAATCTTCCCAAAGATGCAGCCCAATATCTTGATGCATTTAAGGGAATATTTAGAGATATGGAAATGAACAAAGAGTTAATATTGCCAATGATTCATGTTTATGGATTCTCAAAAGCTGTAGATCCAGAATTTGATTTCCATGAGCGCATAAGAATTGCATTATCGGAAGTGGCATTTGAAGTAAAAATGCATAAAGTGCGTCTTGTGGCCCCGGGAAAATGGATGTTGTGTGCATCATTTGCTCTCCCCGAGCGAGTAGCGTTTGCTGATCCCATCTCGGAAATGTAA 1773 42.3 MFTKFMLRPPCSVSIPLSPSLTPFFSNPCTAISIRRSAVVSAAASLSVTLDETLPYGPSLSKGYQPPSIETKSPQQDTEIFFDETRFIRVFDISAIRVSADRCYALESQLRGHLLNWPRIRNIARVPGDEIDAELQKYFNSNDGEHEPLQFLNRRIYGKAEGDGEPLSPVLYRDKLAKTFNSRGFEKFRNLAKLSRPKRTTKKEPSRIRENKSNEYYLLEEVVNIHHDPENAHDLSGLLGDDEYRLGKWKGSTRLLLLDETHAYKLFDEMPEAIKACLTGSPFELVRCKLTLFYSYWQLNEILEALLPKGIIVPSSFETVGHIIHLNLREEHLPYKNVIAKVVLDKNKPKIQTVVNKIDAIDNEFRTMALEVLAGNHSLVTRVVENGLHFHVDLATVYWSSKLATERQRLLNSFTRSDVVCDVFAGVGPLSISAAKKVKYVYANDLNPHAVDYLERNSVLNKLERKIEVFNMDGRRFIDVIFKSQSSRPITQVVMNLPKDAAQYLDAFKGIFRDMEMNKELILPMIHVYGFSKAVDPEFDFHERIRIALSEVAFEVKMHKVRLVAPGKWMLCASFALPERVAFADPISEM 590
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tako4g03684 590 PANTHER TRNA METHYLTRANSFERASE 91 583 - GO:0002939(PANTHER)|GO:0005737(PANTHER)|GO:0008175(PANTHER)|GO:0009019(PANTHER)|GO:0030488(PANTHER)
Tako4g03684 590 CDD AdoMet-MTases 420 484 - -
Tako4g03684 590 ProSiteProfiles SAM-dependent methyltransferase TRM5-TYW2-type domain profile. 317 579 IPR030382 -
Tako4g03684 590 Gene3D - 298 376 - -
Tako4g03684 590 FunFam tRNA (guanine(37)-N1)-methyltransferase 299 377 - -
Tako4g03684 590 FunFam tRNA (guanine(37)-N1)-methyltransferase 380 577 - -
Tako4g03684 590 Pfam Met-10+ like-protein 316 515 IPR030382 -
Tako4g03684 590 Hamap tRNA (guanine(37)-N1)-methyltransferase [TRMT5]. 79 579 IPR025792 GO:0030488(InterPro)|GO:0052906(InterPro)
Tako4g03684 590 Gene3D Vaccinia Virus protein VP39 380 577 IPR029063 -
Tako4g03684 590 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 313 579 IPR029063 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tako4g03684 K15429 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]