Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tako4g03721 | ATGGAGAATTTTTTAGCTCAATTTCAGTCCATCAAAAACTCTTGTAATCGCCTCGTCATTGCAGTTGACGATGTGAATGATGTGTGGCCTCTCGTCAAGGAAGGATTTGAGAAACGGCTTCCATTCAAAAAAGCTATATTGAACAACAAAACCCGTAATCCTGTAACTGTACATAATCTACCAGCTGAATTCATCCTAGCATCAGATCTAAAGGTCCGAAGTCGCTTCATTCCAGATCAACCATTGTTCTGGTTTCGAGAACCATATGCAACTGTCGTTCTCATAACCTGTGAGGATCTGGACGAATTTAAGACAATCCTAAAACCACGTCTGAAATTAACTTTACAAAACGATGAAAAACAGTGGTTCATCGTCTTTGTGTCAAAAGCTGCACGCCATAACGATCAAGCATACAAGATGGCACAAAAAGTTTACGGAAGGGTTGAAGTCGATTTCAATTCAAGAAAAAGGGAAAGGTGCTGTAAATATGATTTACATGGACCTGAAGGAACTTTTTGGGAAGAATTGGAATTCAAAATCATGGAGTGCATTAGAAACAGTCTTGATAGGCGGATTCAGTTTTATGAGGATGAGATTCGGAAGCTCAGTGAGCTACGTTTTATGCCTATTTGGAGCTTCTGTAATTTTTTCATGCTCAAGGAGAGTCTTGCATTCATGTTTGAAATGGCTCATCTTAATGAAGAATCATTGCGGGAATATGATGAACTAGAGCTCTGTTATTTGGAAACAGTTAAGAATCCAGGAAGACTAAGGGAGTTTGGAGGAATGGATATTGGAGATGATCAAGCTGCAATACTAAACCCTACCAACAAACAATTATCGCAAATTGTTCAAGATAATTCTTTTAGAGAGTTTGAATTTCGACAGTACCTTTTCGCATGTCAAGCTAAGCTATTATTTAAGCTAAACCGTCCATTTGAGGTTGCATCAAGAGGGTTTGCATTCATAGTTAGCTTTTCAGAAGCATTGGCCCGGCGTGAGAGTACTTTACCCTTCTGTCTGAGAGAAGTTTGGGTGTTGACTTCTTGCTTGGGTTTGGTCAAAGCAACTGCTGACCATTACAAAAATGGACTAGTGGCACCAGAGGTAGAAAAAGAATTTTATCGTGTACAAGGGGAGTTATATTCTCTATGTCGCGTTAAGTTCATGAGGCTTGCTTATTTACTTGGGAATGGATCAGATATAGAAAGAAGTCCAGTCAACAGTGCTGCACTTAGCATGCTACCGTGGCCTAAACCAGCAATTTGGCCTTCGGTTCCTTCTGATGCTTCATCTGAGGTCCTTGCAAAAGAAAAAATGATTCTAGAAGCTACTCCAAGGATCAAGCATTTTGGTATTGACCATAAAAAACCGTTGCCACTTGAACCCTCTTCTCTTCTACTTGAAGCCAATCGCCAAAAAGGCTCTCTTTCTGCAGATTCAGAATCTCAAGCATCTCAACTCGCTAAAGTTTATATAGCTTCTCAACATGCTCTCCTTAAAACCATCTCCGAACCTGGTTTATGGAAATCATTATCATCTCTACAAGAGTTTGAGAAAAAATATCTAGAGCTAACAAAGGGCGCCGCGGATAACTACCACCATTCATGGTGGAAAAGGCACGGGGTAGTCCTCGATGGCGAAATCGCCTCCGTCTGCTTCAAAAACGGTAACCACGATCTAGCTGCAAAATCATACGAGAAAGTCTGCGCTCTTTACTCCGGTGAAGGATGGCACGATTTGTTAGCGGACGTGCTCCCAAACCTAGCTGAATGCCAGAAGATACTCAACGATCGAGCAGGTTATTTGTCATCGTGTGTGCGACTGCTGTCTCTCGATAAAGGATTGTTTTTGACGAAAGAGCGTCAGGCTTTTCAATCGGAAGTTGTTCGTCTTGCTCATAGTGAAATGGAGGATCCGGTGCCGTTGGATGTGTCGGCGTTGATTACGTTCTCGGGGAATTCTGGGCCGCCTATGGAGCTTTGTGATGGAGATCCGGGTTCGTTGAATGTGACTTTGTGGTGTGATTTTCCGGATGAGATCGCTCTTGAATCACTTAGTCTCACTTTGACTGCCACTAATAACGCCGATGATTGCGTTAAGGCAATCAGGAGCGGTGATGTCACGATACTTAAACCTGGTAGAAACACAATCACGCTTTCATTACCCCCACAGAGACCCGGTTCCTATGTATTGGGTGTTCTCACAGGACAAATTGGTCATTTACGCTTTAGGTCTCATGGTTTCTCAAGAGGTGGGCCCGCAGATAGCGACGACCTCATGAGTTACGATAAACCCACGAGACCCATCTTAAAGGTGTTCAAACCAAGATCCCTTGTTGACCTTTCTACAAAAGTTTCATCGGCATTACTAATGAACGAACCTCAATGGGTTGGAATTATTGTAAAACCGTTTAAATACTCTTTAAAAGGAGCTGTTTTGCATATCAAAACCGGACCTGGATTGAAGATTGAGGAGTCACGTGACATCGAAATGGAAACACATTTGAATTCAGATAACGAGAATAATAACAATGATGATGATAATAATAATGATGACAAAAATAATAAAGAATTTTCTCATCTTACTTTTAAAAACGGAAATATAGAGTTACCGGATTGGGCGAGTAATGTTGTTGGTGTTTTATGGATACCTGTGCGGGCCATACATGATGGGCTAGCAAGAGGAACATCAGCAGGCACAATATTGTCAGAAAGAGCAAATGTAGTAGATGGATTGAGAACCTTAGGACTAAAACTTGAATTCGGAGTGTCGCGAAATCAGATATTTGAAAAAACATTAGCGTTTCATTTCACCGACCCGTTCCACGTCAGCACACGTGTCGTAGACAAAGGCAGTGATGGTGCTTTGCTTTTACAGGTGATATTACAGTCACAAGTCAAAGCCTCGTTGACTATTCATGATGCATGGTTAGATTTAGAAGACGGTTCTGTTCATAATGGCAAACCAACATCTGCTTTGTTTCCTCTTGTTGTTCCTCAATCATCTAGAGCCGGAATTTTATTTGATGAAGAGAAGGCATTGCATCCCGACACAATATTAAATATTAAATACGAAATATCTGGGGACAGAAATTACGGATCTCACACTCCCGTATCCTTGGAACCAAAAGTACAGGAAAACGACCCGTTCCTAACATTTAGGAGTGGGCTTGAGTTGCAACGACCGGTTCTAGAACCTTCTTTAGCAGTTGGTTTTCTTCCTCTTCCTTCGAATGGTCTTAGAGTCGGTCAACTATTTACCATGAAATGGAGAATCGAAAGATTAAAGTTTTCTAAAGATGAAACAAACAACGATGAAGTAGTGTATGAAGTGAAAGCGAATTTAAAAAATTGGATGATTGCCGGGAGGAAGCGAGGCCATGCCCCTCTCTCCACAAAGCAAGGTTCAAGGATCGAGATTTCAGTATTGTGTGTACCGCTAGGTGCCGGCTATTTCCGGCCTCCACAACTGGAATTGCCGAATGTTAATCGAGCAAATATATGTTGCAATCCTGCGGGCCCACATTTGGTGTGTGTGCTACCTCCACCTTTGAGCTCATCGTTTTGCATTCCCGCATGA | 3582 | 41.85 | MENFLAQFQSIKNSCNRLVIAVDDVNDVWPLVKEGFEKRLPFKKAILNNKTRNPVTVHNLPAEFILASDLKVRSRFIPDQPLFWFREPYATVVLITCEDLDEFKTILKPRLKLTLQNDEKQWFIVFVSKAARHNDQAYKMAQKVYGRVEVDFNSRKRERCCKYDLHGPEGTFWEELEFKIMECIRNSLDRRIQFYEDEIRKLSELRFMPIWSFCNFFMLKESLAFMFEMAHLNEESLREYDELELCYLETVKNPGRLREFGGMDIGDDQAAILNPTNKQLSQIVQDNSFREFEFRQYLFACQAKLLFKLNRPFEVASRGFAFIVSFSEALARRESTLPFCLREVWVLTSCLGLVKATADHYKNGLVAPEVEKEFYRVQGELYSLCRVKFMRLAYLLGNGSDIERSPVNSAALSMLPWPKPAIWPSVPSDASSEVLAKEKMILEATPRIKHFGIDHKKPLPLEPSSLLLEANRQKGSLSADSESQASQLAKVYIASQHALLKTISEPGLWKSLSSLQEFEKKYLELTKGAADNYHHSWWKRHGVVLDGEIASVCFKNGNHDLAAKSYEKVCALYSGEGWHDLLADVLPNLAECQKILNDRAGYLSSCVRLLSLDKGLFLTKERQAFQSEVVRLAHSEMEDPVPLDVSALITFSGNSGPPMELCDGDPGSLNVTLWCDFPDEIALESLSLTLTATNNADDCVKAIRSGDVTILKPGRNTITLSLPPQRPGSYVLGVLTGQIGHLRFRSHGFSRGGPADSDDLMSYDKPTRPILKVFKPRSLVDLSTKVSSALLMNEPQWVGIIVKPFKYSLKGAVLHIKTGPGLKIEESRDIEMETHLNSDNENNNNDDDNNNDDKNNKEFSHLTFKNGNIELPDWASNVVGVLWIPVRAIHDGLARGTSAGTILSERANVVDGLRTLGLKLEFGVSRNQIFEKTLAFHFTDPFHVSTRVVDKGSDGALLLQVILQSQVKASLTIHDAWLDLEDGSVHNGKPTSALFPLVVPQSSRAGILFDEEKALHPDTILNIKYEISGDRNYGSHTPVSLEPKVQENDPFLTFRSGLELQRPVLEPSLAVGFLPLPSNGLRVGQLFTMKWRIERLKFSKDETNNDEVVYEVKANLKNWMIAGRKRGHAPLSTKQGSRIEISVLCVPLGAGYFRPPQLELPNVNRANICCNPAGPHLVCVLPPPLSSSFCIPA | 1193 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tako4g03721 | 1193 | MobiDBLite | consensus disorder prediction | 835 | 859 | - | - | |
| Tako4g03721 | 1193 | PANTHER | EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1-TMEM1 | 2 | 1192 | IPR045126 | GO:0006891(PANTHER)|GO:0034498(PANTHER)|GO:0048193(InterPro)|GO:1990071(InterPro)|GO:1990071(PANTHER) | |
| Tako4g03721 | 1193 | Pfam | Trafficking protein particle complex subunit 10, TRAPPC10 | 1081 | 1161 | IPR022233 | - | |
| Tako4g03721 | 1193 | Coils | Coil | 185 | 205 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tako4g03721 | K20307 | trafficking protein particle complex subunit 10 |