AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tako4g03721 ATGGAGAATTTTTTAGCTCAATTTCAGTCCATCAAAAACTCTTGTAATCGCCTCGTCATTGCAGTTGACGATGTGAATGATGTGTGGCCTCTCGTCAAGGAAGGATTTGAGAAACGGCTTCCATTCAAAAAAGCTATATTGAACAACAAAACCCGTAATCCTGTAACTGTACATAATCTACCAGCTGAATTCATCCTAGCATCAGATCTAAAGGTCCGAAGTCGCTTCATTCCAGATCAACCATTGTTCTGGTTTCGAGAACCATATGCAACTGTCGTTCTCATAACCTGTGAGGATCTGGACGAATTTAAGACAATCCTAAAACCACGTCTGAAATTAACTTTACAAAACGATGAAAAACAGTGGTTCATCGTCTTTGTGTCAAAAGCTGCACGCCATAACGATCAAGCATACAAGATGGCACAAAAAGTTTACGGAAGGGTTGAAGTCGATTTCAATTCAAGAAAAAGGGAAAGGTGCTGTAAATATGATTTACATGGACCTGAAGGAACTTTTTGGGAAGAATTGGAATTCAAAATCATGGAGTGCATTAGAAACAGTCTTGATAGGCGGATTCAGTTTTATGAGGATGAGATTCGGAAGCTCAGTGAGCTACGTTTTATGCCTATTTGGAGCTTCTGTAATTTTTTCATGCTCAAGGAGAGTCTTGCATTCATGTTTGAAATGGCTCATCTTAATGAAGAATCATTGCGGGAATATGATGAACTAGAGCTCTGTTATTTGGAAACAGTTAAGAATCCAGGAAGACTAAGGGAGTTTGGAGGAATGGATATTGGAGATGATCAAGCTGCAATACTAAACCCTACCAACAAACAATTATCGCAAATTGTTCAAGATAATTCTTTTAGAGAGTTTGAATTTCGACAGTACCTTTTCGCATGTCAAGCTAAGCTATTATTTAAGCTAAACCGTCCATTTGAGGTTGCATCAAGAGGGTTTGCATTCATAGTTAGCTTTTCAGAAGCATTGGCCCGGCGTGAGAGTACTTTACCCTTCTGTCTGAGAGAAGTTTGGGTGTTGACTTCTTGCTTGGGTTTGGTCAAAGCAACTGCTGACCATTACAAAAATGGACTAGTGGCACCAGAGGTAGAAAAAGAATTTTATCGTGTACAAGGGGAGTTATATTCTCTATGTCGCGTTAAGTTCATGAGGCTTGCTTATTTACTTGGGAATGGATCAGATATAGAAAGAAGTCCAGTCAACAGTGCTGCACTTAGCATGCTACCGTGGCCTAAACCAGCAATTTGGCCTTCGGTTCCTTCTGATGCTTCATCTGAGGTCCTTGCAAAAGAAAAAATGATTCTAGAAGCTACTCCAAGGATCAAGCATTTTGGTATTGACCATAAAAAACCGTTGCCACTTGAACCCTCTTCTCTTCTACTTGAAGCCAATCGCCAAAAAGGCTCTCTTTCTGCAGATTCAGAATCTCAAGCATCTCAACTCGCTAAAGTTTATATAGCTTCTCAACATGCTCTCCTTAAAACCATCTCCGAACCTGGTTTATGGAAATCATTATCATCTCTACAAGAGTTTGAGAAAAAATATCTAGAGCTAACAAAGGGCGCCGCGGATAACTACCACCATTCATGGTGGAAAAGGCACGGGGTAGTCCTCGATGGCGAAATCGCCTCCGTCTGCTTCAAAAACGGTAACCACGATCTAGCTGCAAAATCATACGAGAAAGTCTGCGCTCTTTACTCCGGTGAAGGATGGCACGATTTGTTAGCGGACGTGCTCCCAAACCTAGCTGAATGCCAGAAGATACTCAACGATCGAGCAGGTTATTTGTCATCGTGTGTGCGACTGCTGTCTCTCGATAAAGGATTGTTTTTGACGAAAGAGCGTCAGGCTTTTCAATCGGAAGTTGTTCGTCTTGCTCATAGTGAAATGGAGGATCCGGTGCCGTTGGATGTGTCGGCGTTGATTACGTTCTCGGGGAATTCTGGGCCGCCTATGGAGCTTTGTGATGGAGATCCGGGTTCGTTGAATGTGACTTTGTGGTGTGATTTTCCGGATGAGATCGCTCTTGAATCACTTAGTCTCACTTTGACTGCCACTAATAACGCCGATGATTGCGTTAAGGCAATCAGGAGCGGTGATGTCACGATACTTAAACCTGGTAGAAACACAATCACGCTTTCATTACCCCCACAGAGACCCGGTTCCTATGTATTGGGTGTTCTCACAGGACAAATTGGTCATTTACGCTTTAGGTCTCATGGTTTCTCAAGAGGTGGGCCCGCAGATAGCGACGACCTCATGAGTTACGATAAACCCACGAGACCCATCTTAAAGGTGTTCAAACCAAGATCCCTTGTTGACCTTTCTACAAAAGTTTCATCGGCATTACTAATGAACGAACCTCAATGGGTTGGAATTATTGTAAAACCGTTTAAATACTCTTTAAAAGGAGCTGTTTTGCATATCAAAACCGGACCTGGATTGAAGATTGAGGAGTCACGTGACATCGAAATGGAAACACATTTGAATTCAGATAACGAGAATAATAACAATGATGATGATAATAATAATGATGACAAAAATAATAAAGAATTTTCTCATCTTACTTTTAAAAACGGAAATATAGAGTTACCGGATTGGGCGAGTAATGTTGTTGGTGTTTTATGGATACCTGTGCGGGCCATACATGATGGGCTAGCAAGAGGAACATCAGCAGGCACAATATTGTCAGAAAGAGCAAATGTAGTAGATGGATTGAGAACCTTAGGACTAAAACTTGAATTCGGAGTGTCGCGAAATCAGATATTTGAAAAAACATTAGCGTTTCATTTCACCGACCCGTTCCACGTCAGCACACGTGTCGTAGACAAAGGCAGTGATGGTGCTTTGCTTTTACAGGTGATATTACAGTCACAAGTCAAAGCCTCGTTGACTATTCATGATGCATGGTTAGATTTAGAAGACGGTTCTGTTCATAATGGCAAACCAACATCTGCTTTGTTTCCTCTTGTTGTTCCTCAATCATCTAGAGCCGGAATTTTATTTGATGAAGAGAAGGCATTGCATCCCGACACAATATTAAATATTAAATACGAAATATCTGGGGACAGAAATTACGGATCTCACACTCCCGTATCCTTGGAACCAAAAGTACAGGAAAACGACCCGTTCCTAACATTTAGGAGTGGGCTTGAGTTGCAACGACCGGTTCTAGAACCTTCTTTAGCAGTTGGTTTTCTTCCTCTTCCTTCGAATGGTCTTAGAGTCGGTCAACTATTTACCATGAAATGGAGAATCGAAAGATTAAAGTTTTCTAAAGATGAAACAAACAACGATGAAGTAGTGTATGAAGTGAAAGCGAATTTAAAAAATTGGATGATTGCCGGGAGGAAGCGAGGCCATGCCCCTCTCTCCACAAAGCAAGGTTCAAGGATCGAGATTTCAGTATTGTGTGTACCGCTAGGTGCCGGCTATTTCCGGCCTCCACAACTGGAATTGCCGAATGTTAATCGAGCAAATATATGTTGCAATCCTGCGGGCCCACATTTGGTGTGTGTGCTACCTCCACCTTTGAGCTCATCGTTTTGCATTCCCGCATGA 3582 41.85 MENFLAQFQSIKNSCNRLVIAVDDVNDVWPLVKEGFEKRLPFKKAILNNKTRNPVTVHNLPAEFILASDLKVRSRFIPDQPLFWFREPYATVVLITCEDLDEFKTILKPRLKLTLQNDEKQWFIVFVSKAARHNDQAYKMAQKVYGRVEVDFNSRKRERCCKYDLHGPEGTFWEELEFKIMECIRNSLDRRIQFYEDEIRKLSELRFMPIWSFCNFFMLKESLAFMFEMAHLNEESLREYDELELCYLETVKNPGRLREFGGMDIGDDQAAILNPTNKQLSQIVQDNSFREFEFRQYLFACQAKLLFKLNRPFEVASRGFAFIVSFSEALARRESTLPFCLREVWVLTSCLGLVKATADHYKNGLVAPEVEKEFYRVQGELYSLCRVKFMRLAYLLGNGSDIERSPVNSAALSMLPWPKPAIWPSVPSDASSEVLAKEKMILEATPRIKHFGIDHKKPLPLEPSSLLLEANRQKGSLSADSESQASQLAKVYIASQHALLKTISEPGLWKSLSSLQEFEKKYLELTKGAADNYHHSWWKRHGVVLDGEIASVCFKNGNHDLAAKSYEKVCALYSGEGWHDLLADVLPNLAECQKILNDRAGYLSSCVRLLSLDKGLFLTKERQAFQSEVVRLAHSEMEDPVPLDVSALITFSGNSGPPMELCDGDPGSLNVTLWCDFPDEIALESLSLTLTATNNADDCVKAIRSGDVTILKPGRNTITLSLPPQRPGSYVLGVLTGQIGHLRFRSHGFSRGGPADSDDLMSYDKPTRPILKVFKPRSLVDLSTKVSSALLMNEPQWVGIIVKPFKYSLKGAVLHIKTGPGLKIEESRDIEMETHLNSDNENNNNDDDNNNDDKNNKEFSHLTFKNGNIELPDWASNVVGVLWIPVRAIHDGLARGTSAGTILSERANVVDGLRTLGLKLEFGVSRNQIFEKTLAFHFTDPFHVSTRVVDKGSDGALLLQVILQSQVKASLTIHDAWLDLEDGSVHNGKPTSALFPLVVPQSSRAGILFDEEKALHPDTILNIKYEISGDRNYGSHTPVSLEPKVQENDPFLTFRSGLELQRPVLEPSLAVGFLPLPSNGLRVGQLFTMKWRIERLKFSKDETNNDEVVYEVKANLKNWMIAGRKRGHAPLSTKQGSRIEISVLCVPLGAGYFRPPQLELPNVNRANICCNPAGPHLVCVLPPPLSSSFCIPA 1193
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tako4g03721 1193 MobiDBLite consensus disorder prediction 835 859 - -
Tako4g03721 1193 PANTHER EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1-TMEM1 2 1192 IPR045126 GO:0006891(PANTHER)|GO:0034498(PANTHER)|GO:0048193(InterPro)|GO:1990071(InterPro)|GO:1990071(PANTHER)
Tako4g03721 1193 Pfam Trafficking protein particle complex subunit 10, TRAPPC10 1081 1161 IPR022233 -
Tako4g03721 1193 Coils Coil 185 205 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tako4g03721 K20307 trafficking protein particle complex subunit 10