AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tako4g03876 ATGGGTACAGTCAGATCCGAGGCGCTAATGCGATGGGTTTGGGAAGCTAACCGGGGCAACCCGGTCCGTGAAAACGCTACTCTCACCTTCGGTACAGACGGAAACCTTATCCTGGCGGATTCTGATGGCCGGATTGCTTGGCAAACTAACACTGCCAACAAAGGTGTCGTCGGATTTCAAGTCCTTCCTACCGGAAACATGGTTCTTCATGATGGAAAAGGTAACTTCATATGGCAAAGCTTCGATTCACCTACTGACACTCTCTTGGTGGGTCAATCTCTCAAATCCGGTGGGGCCAGTAAGCTAGTGAGTCGGGCTTCTGCCATGAACAACGTCAATGGAGCATATAGCTTGGTGATGGAGCCTAAACAGCTAGCCATGTATTACAAAAGCCCTAACTCCCCTCGCCCAATGCTTTACTGGTCGTCCGCCGAATGGTTCACAATTGACAAGGGTAGTTTGGCCAACTTAACTCTCACTTCAGTCCCAGATACCGATGAGGGTTTTCTTTATTATTTAGTTTTTGATTACTTCACCAAAAACCCATCATCAAATCAAAATCGCTACATGGCCTACTCAAGATACAACAACACGTTGTCTTATCTTCGATTAGGGATAGATGGAAACCTTAGATTCTACACGTACAATCCGAACGTGCAAGGTGTCGCGTGGGAATTAGTGTACACGTTTCTAGACCGGGATTCCATGGAAGGTGAGTGCCAGTTGCCGGAAAGATGTGGGAAGTTTGGGTTATGTGAGAACAACCAATGTGTCGCATGTCCAACACCAAACGGATTAATTGGGTGGAGTAGAGAGTGTGAGGCCAAGGTGACATCTTGTAAAGCTAGTGAGTTTGGGTATTACAAACTTGAAGGTGTTGACCATTTTATGATTAAGTACACTAGGGGAGATGGTGGAAGGAAGGAAAGTGACTGCGAAAGTAAATGCACTAAGGACTGCAAGTGTATGGGATATTTCTATCATACGAGTGATTCGAGGTGCTGGATCGCTTATGATTTGAAAACATTGACAAAAAATGGAAACTCGACTCATTTGGCGTACATCAAAGCACCCAAGAAGTAG 1083 45.61 MGTVRSEALMRWVWEANRGNPVRENATLTFGTDGNLILADSDGRIAWQTNTANKGVVGFQVLPTGNMVLHDGKGNFIWQSFDSPTDTLLVGQSLKSGGASKLVSRASAMNNVNGAYSLVMEPKQLAMYYKSPNSPRPMLYWSSAEWFTIDKGSLANLTLTSVPDTDEGFLYYLVFDYFTKNPSSNQNRYMAYSRYNNTLSYLRLGIDGNLRFYTYNPNVQGVAWELVYTFLDRDSMEGECQLPERCGKFGLCENNQCVACPTPNGLIGWSRECEAKVTSCKASEFGYYKLEGVDHFMIKYTRGDGGRKESDCESKCTKDCKCMGYFYHTSDSRCWIAYDLKTLTKNGNSTHLAYIKAPKK 360
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tako4g03876 360 Pfam D-mannose binding lectin 13 96 IPR001480 -
Tako4g03876 360 FunFam Os04g0303100 protein 3 137 - -
Tako4g03876 360 CDD B-lectin 1 84 IPR001480 -
Tako4g03876 360 Gene3D - 4 82 IPR036426 -
Tako4g03876 360 Pfam S-locus glycoprotein domain 152 265 IPR000858 GO:0048544(InterPro)
Tako4g03876 360 CDD PAN-AP-plant 279 356 - -
Tako4g03876 360 ProSiteProfiles Bulb-type lectin domain profile. 1 82 IPR001480 -
Tako4g03876 360 SMART blect-4 1 84 IPR001480 -
Tako4g03876 360 SUPERFAMILY alpha-D-mannose-specific plant lectins 9 146 IPR036426 -
Tako4g03876 360 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE-THREONINE-PROTEIN KINASE SD2-5 11 358 IPR051343 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tako4g03876 - -