AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tako4g03893 ATGGCTTCTCCCCATTCTATCTACACAACTTCCCTTCTACTTTTACTCACCTTTCAACTTCTTTCCACCATTTCAAAAGCTGTTGTTCCTCCTTCAGACACCTTCACTTACATAAACGAAGGTGAGTTCGGTGATTATGTAGTTGAGTACAATGCAGATTATCGTACTCTTCCACCTTTTAACAACCCATTCCAGCTATGTTTCTACAACACCACCCCCAACGCATTCACTCTAGCTTTACGTATGGGTACAGTCCGATCAGAGTCACTCATGCGTTGGGTTTGGGAAGCTAACCGGGGTAACACAGTGCGTGAAAACGCCACCTTGACCTTTGGTGCTGACGGTAACCTTATCTTGGCGGATTCTGATGGCCGGATTGCATGGCAAACTAACACCGCCAACAAAGGCGTCGTCGGTTTTCAAGTCCTTCCTACCGGTAACATGGTTCTTCATGATGGCAAGGGCAAATTCATATGGCAAAGCTTCGATTCACCAACCGACACTCTCTTGGTGGGTCAATCTCTCAAATCCGGTGGGGCAAGTAAGCTGGTGAGTCGGGCTTCTGCCGTGAACAACGTCGATGGAGCATATAGCTTGGTGATGGAGCCTAAACAGCTAGCCATGTATTACAAAAGCGCCAACTCGCCTCGCCCAATGATTTATTGGACGTCTGCCGAATGGTTTAATGTTGACGTCGGAAGTGTGACTAACGATACCGATGAGGGTTTTCTTTACTACCTAACTTTCGAGTATTACGTCACAAACCCTCCGTCAGGTTGGAATCGCAACATGGCTTATTCAAAATACAACAACACGTTATCTTATCTTCGACTGGGGATAGATGGAAACCTTAGATTCTATACGTATAATCCAAACGTGCAAGGTGTCGCGTGGGAATTGGTGTACACGTTTCTAGACCGGGGTTCCATTGAAGGTGAGTGTCAGTTGCCGGAAAGATGTGGGAAGTTCGGGTTATGTGAGAACAACCAATGTGTTGCATGTCCAACACCAAACGGATTAAGTGGATGGAGTAACGACTGTGAGGCTAAGAAGGTGTCTTGTAAAGCTAGTGAGTTTGGATACTATAAGCTTGAAGGCGTTGACCATTTTATGATTAAGTACACAAGAGGAGATGGTGGAAGGAAGCAAAGTGATTGCGAAAGTAAATGCACAAAGGATTGTAAGTGCATGGGATATTTCTATCACACGGCTGATTCGAGGTGCTGGATTGCTTACGATTTGAAAACATTAACAAAAGTTGGAAACTCGACGCATTTGGCTTACATCAAAGCACCAAAGAAGTAG 1305 45.13 MASPHSIYTTSLLLLLTFQLLSTISKAVVPPSDTFTYINEGEFGDYVVEYNADYRTLPPFNNPFQLCFYNTTPNAFTLALRMGTVRSESLMRWVWEANRGNTVRENATLTFGADGNLILADSDGRIAWQTNTANKGVVGFQVLPTGNMVLHDGKGKFIWQSFDSPTDTLLVGQSLKSGGASKLVSRASAVNNVDGAYSLVMEPKQLAMYYKSANSPRPMIYWTSAEWFNVDVGSVTNDTDEGFLYYLTFEYYVTNPPSGWNRNMAYSKYNNTLSYLRLGIDGNLRFYTYNPNVQGVAWELVYTFLDRGSIEGECQLPERCGKFGLCENNQCVACPTPNGLSGWSNDCEAKKVSCKASEFGYYKLEGVDHFMIKYTRGDGGRKQSDCESKCTKDCKCMGYFYHTADSRCWIAYDLKTLTKVGNSTHLAYIKAPKK 434
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tako4g03893 434 CDD B-lectin 48 165 IPR001480 -
Tako4g03893 434 ProSiteProfiles Bulb-type lectin domain profile. 32 163 IPR001480 -
Tako4g03893 434 SMART blect-4 48 165 IPR001480 -
Tako4g03893 434 CDD PAN-AP-plant 351 430 - -
Tako4g03893 434 Pfam D-mannose binding lectin 94 177 IPR001480 -
Tako4g03893 434 Gene3D - 44 164 IPR036426 -
Tako4g03893 434 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE-THREONINE-PROTEIN KINASE SD2-5 59 432 IPR051343 -
Tako4g03893 434 PIRSF SLG 3 434 IPR035446 -
Tako4g03893 434 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 210 IPR036426 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tako4g03893 - -