AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tako4g03941 ATGAGGTGTAACGCATGCTGGCGGGAGGTGGAAGGACGGGCTATTTCTACCACATGTGGCCATCTCTTGTGCAATGAAGATGCAAGTAAGATACTAAGTAATGATGCAGCTTGCCCCATTTGTGATCAAGTACTTTCCAAAAGTCTCATGAAACCTGTAGATATCAACCCGAATGAAGAATGGATAAATATGTCTATGGCTGGCATATCTCCACAGATATTAATGAAGAGTGCATACAGAAGTGTCATGTTCTATATTGGACAAAAGGAACTAGAAATGCAATTCAAAATGAACAGAATAGTAGCTCAATGCAGACAAAAATGCGAAACAATGCAAGAAAAATTCACAGAAAAAATGGAGCAGTTGCATACCGCATACCAGAAACTAGGAAAAAGGTGTCAAATGATGGAAAAAGAAATTCAAAACTTGTCCAAAGATAAACAAGAACTCCAAGAAAAGTTCTCTGAAAAATCCAGGCAAAAGAGAAAACTGGATGAGATGTATGACCAATTGAGAACTGAGTATGAATCAGTCAAACGGTCAGCCATTCAACCTGCAAACAACAACTTTTTCTCAAGGGGTGATTCTGATCTGTTTGCAAGTCCAGCTGGCATGATGGACAACAGAGATCCCATAAGGAAAGGACCCCGTGAAGATATATGGCCAGCAGCAGCTACAAGACAAAACAGTTCAAACTCTGGGCCGTTTGATATCTCTACTAGCCCACCTGCAAAACACTCGGGAAATCCAGTTGACAACCGGAGAACTATCGGCCGCCAGATGTTTGGCGGTGGCGGCGGTGTTGGTGGTGGTGGCGGCGGCGGTGGTGGTGGTGGAGTTGGAAATTCCGGTATGGCGTTGAGGAATCTTATTATATCACCAATGAAACGGCCTCAACTCTCTCGTAGCCGACCTCAATTGTTCACGTTGTAG 933 43.52 MRCNACWREVEGRAISTTCGHLLCNEDASKILSNDAACPICDQVLSKSLMKPVDINPNEEWINMSMAGISPQILMKSAYRSVMFYIGQKELEMQFKMNRIVAQCRQKCETMQEKFTEKMEQLHTAYQKLGKRCQMMEKEIQNLSKDKQELQEKFSEKSRQKRKLDEMYDQLRTEYESVKRSAIQPANNNFFSRGDSDLFASPAGMMDNRDPIRKGPREDIWPAAATRQNSSNSGPFDISTSPPAKHSGNPVDNRRTIGRQMFGGGGGVGGGGGGGGGGGVGNSGMALRNLIISPMKRPQLSRSRPQLFTL 310
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tako4g03941 310 Coils Coil 119 181 - -
Tako4g03941 310 MobiDBLite consensus disorder prediction 225 247 - -
Tako4g03941 310 MobiDBLite consensus disorder prediction 225 252 - -
Tako4g03941 310 Gene3D Zinc-RING finger domain, C3HC4 (zinc finger) 1 53 IPR013083 -
Tako4g03941 310 SUPERFAMILY Myosin rod fragments 105 180 - -
Tako4g03941 310 FunFam E3 ubiquitin-protein ligase CCNB1IP1 homolog 1 53 - -
Tako4g03941 310 Pfam zinc-RING finger domain 2 43 IPR001841 -
Tako4g03941 310 SUPERFAMILY RING-U-box 2 50 - -
Tako4g03941 310 PANTHER E3 UBIQUITIN-PROTEIN LIGASE CCNB1IP1 HOMOLOG 1 310 - GO:0051026(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tako4g03941 K10639 E3 ubiquitin-protein ligase CCNP1IP1 [EC:2.3.2.27]