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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tako4g03962 ATGGCTTCCCATTCCTTAACTCCCAGCAATTTCAGACTCCAACTTCTCATTTCATCGAAACCCCAATTAAACTCAATCCTCAAATCATCTAATCGGTTTCAATTAAGCATACCCACAGCCAGATTTTCTTCATCGATTCGCTCTATGGGTTCTTCGTCTTCTTCATCTCAGAAACCAGACGCCTCAACTCAAGAGGCTGGAAAGATGGATTATAAATCTGTTAGCGAGCAAGAATGGAAGAAGAAGCTTAGTGGAGAACAGTTTTATGTAACTCGACAGAAAGGAACAGAACGGGCTTTCTCCGGGGAATACTGGAACTCGAAAACCCCTGGAACTTACCATTGCATCTGTTGCGACACTCCATTATTCGAGTCATCTACGAAGTTCGATAGTGGAACTGGCTGGCCGTCGTATTATCAGCCGATCGGAAACAACGTGAAGTCGAAGTTAGATTTGTCGATCATTTTCATGCCTCGACAGGAAGTTGTATGTGCTGCTTGTGATGCTCATCTTGGTCATGTCTTCGACGACGGTCCTCCGCCCACCGGAAAACGCTATTGCATCAATAGTGCTTCCTTGAAGTTGAATCCGAAGTAG 597 44.72 MASHSLTPSNFRLQLLISSKPQLNSILKSSNRFQLSIPTARFSSSIRSMGSSSSSSQKPDASTQEAGKMDYKSVSEQEWKKKLSGEQFYVTRQKGTERAFSGEYWNSKTPGTYHCICCDTPLFESSTKFDSGTGWPSYYQPIGNNVKSKLDLSIIFMPRQEVVCAACDAHLGHVFDDGPPPTGKRYCINSASLKLNPK 198
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tako4g03962 198 ProSiteProfiles Methionine-R-sulfoxide reductase (MsrB) domain profile. 76 198 IPR002579 GO:0033743(InterPro)
Tako4g03962 198 Pfam SelR domain 78 196 IPR002579 GO:0033743(InterPro)
Tako4g03962 198 MobiDBLite consensus disorder prediction 46 70 - -
Tako4g03962 198 FunFam Peptide methionine sulfoxide reductase MsrB 68 198 - -
Tako4g03962 198 NCBIfam peptide-methionine (R)-S-oxide reductase MsrB 75 197 IPR002579 GO:0033743(InterPro)
Tako4g03962 198 MobiDBLite consensus disorder prediction 46 63 - -
Tako4g03962 198 Gene3D Peptide methionine sulfoxide reductase. 53 198 - -
Tako4g03962 198 PANTHER METHIONINE SULFOXIDE REDUCTASE 42 197 IPR028427 GO:0005737(PANTHER)|GO:0006979(InterPro)|GO:0016671(InterPro)|GO:0030091(InterPro)|GO:0033743(PANTHER)
Tako4g03962 198 SUPERFAMILY Mss4-like 74 197 IPR011057 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tako4g03962 K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]