AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tako4g03971 | ATGCTGCCACCATCGAGACGCGAGTTTAAAGATATTTATGTAGTATTCGAACTCATGGAGTCTGATCTTCACCAAGTCATTAAAGCCAATGACGACTTAACTCACGAACACCATCGGTTTTTTCTATATCAAATGCTTCGAGCATTAAAGTACATGCATACAGCAAATGTATATCATCGAGATTTAAAACCAAAGAACATATTAGCAAATGCTAATTGCAAACTCAAGATTTGCGACTTTGGACTAGCAAGAGCTGCTTTTACTGATACCCCTACAACAATATTTTGGACTGATTATGTTGCAACAAGATGGTATAGAGCTCCTGAACTTTGCGGATCTTTTTATTCCAAGTATACCCCTGCTGTTGATATATGGGGAATTGGATGTATTTTTGCTGAAGTTTTAACAGGAAAGCCACTTTTTCCCGGGAAAAGTGTTGTTCATCAATTGGAACTCATCACCGATCTTCTTGGAACACCATCTTCAGATACAATTTCAAGAGTGCGTAATGACAAGGCAAGAAAATACCTAACAGACATGCGGAAAAAGAAACCCGTGACTTTTTCCGAGAAGTTTCTAGAAGTTGACCCGCTGGCACTTCGATTATTACAAAGGTTGTTGGCTTTTGATCCCAAGGATCGACCAACTGCTGAACAGGCACTAGCGGATCCGTACTTCAAGGGGCTATCGAAAGTGGAGAGGGAGCCATCATGTCAATCTTTTTCAAAACTGGAGTTTGAATTTGAAAGGCGAAGAGTCACAAAAGAAGACATCAGGGAGTTGATATTCCGGGAGATTCTAGAATACCATCCCAATTTGCTTAAAGATTACATGGCGGGAAATGACCGCACTAATTTCCTCTATCCCAGTGCGATTGGTCAGTTTAGGAGGCAGTTTGCGTATTTTGAGGAAAACGGTGGGAAAAGTGGGCCCGTTATACCCCCAGAGAGGAAGCATGTATCCCTCCCTAGGTCTACGGTTTCTTCAAGTATGACAGCTCCAAAGTTGCAGCAGTGTTTAGCAGCTTTTGAGAATAAGGCGGTTGTGGATAACAACAACAATAACATGTCTTGTTCTAATTCTAATTCTAATGGTAATGGTAATGGTAATGGTGGGAGAGTTGCAGTGGATGCTTCCGGAAACATCTTTAGTGCTGCTGCCCGACCGCCCCCACGGATGCCCAAAGGAAGAGTTGTGGGCCCGGTTTTACCATTGGAAGGAAGTAGGGAGATAAAAGACGCATACGACCCACGGGTAATCCTTAGAAACGGTCCCGTTGGTGTTTCTCCACATTACATTCCTTCATCCTACAGGGGCAATTCCGGAAACCAAGTAAAAATCCTTCATGGGGAAAGCGACAATAATAATAATAATAGCAAACAACCACAAGGGAAAATGTCCACGTCACCAGGGTTGATCAACAGCAACCCGTATAATTACAACCAATCGTCGCACGGTCAACAACAACATCAGTCAGTGGATGCAAAGTTTATACAGTCACAGACACAGTCACAGTCAGCACAGTATGGTGTGGCGGTTGGGGTTGTTCAAATGGGACAGTTTTAG | 1566 | 42.91 | MLPPSRREFKDIYVVFELMESDLHQVIKANDDLTHEHHRFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKICDFGLARAAFTDTPTTIFWTDYVATRWYRAPELCGSFYSKYTPAVDIWGIGCIFAEVLTGKPLFPGKSVVHQLELITDLLGTPSSDTISRVRNDKARKYLTDMRKKKPVTFSEKFLEVDPLALRLLQRLLAFDPKDRPTAEQALADPYFKGLSKVEREPSCQSFSKLEFEFERRRVTKEDIRELIFREILEYHPNLLKDYMAGNDRTNFLYPSAIGQFRRQFAYFEENGGKSGPVIPPERKHVSLPRSTVSSSMTAPKLQQCLAAFENKAVVDNNNNNMSCSNSNSNGNGNGNGGRVAVDASGNIFSAAARPPPRMPKGRVVGPVLPLEGSREIKDAYDPRVILRNGPVGVSPHYIPSSYRGNSGNQVKILHGESDNNNNNSKQPQGKMSTSPGLINSNPYNYNQSSHGQQQHQSVDAKFIQSQTQSQSAQYGVAVGVVQMGQF | 521 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tako4g03971 | 521 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 271 | - | - | |
| Tako4g03971 | 521 | MobiDBLite | consensus disorder prediction | 431 | 494 | - | - | |
| Tako4g03971 | 521 | SMART | serkin-6 | 5 | 226 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Tako4g03971 | 521 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 4 | 267 | IPR050117 | GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER) | |
| Tako4g03971 | 521 | FunFam | Mitogen-activated protein kinase | 21 | 249 | - | - | |
| Tako4g03971 | 521 | Gene3D | Transferase(Phosphotransferase) domain 1 | 21 | 249 | - | - | |
| Tako4g03971 | 521 | ProSiteProfiles | Protein kinase domain profile. | 1 | 226 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Tako4g03971 | 521 | SUPERFAMILY | Protein kinase-like (PK-like) | 9 | 230 | IPR011009 | - | |
| Tako4g03971 | 521 | MobiDBLite | consensus disorder prediction | 434 | 494 | - | - | |
| Tako4g03971 | 521 | Pfam | Protein kinase domain | 9 | 226 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tako4g03971 | - | - |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Tako1g02517 | . | 142 | 231 | MAP Kinase gene family | AT5G19010 | 60.638 | 2.17e-30 | 112.0 | |
| Tako1g02878 | . | 174 | 374 | MAP Kinase gene family | AT1G73670 | 67.164 | 1.44e-89 | 271.0 | |
| Tako1g05383 | . | 136 | 321 | MAP Kinase gene family | AT2G18170 | 34.123 | 7.25e-28 | 113.0 | |
| Tako1g06196 | . | 217 | 369 | MAP Kinase gene family | AT1G10210 | 30.968 | 1.69e-16 | 73.9 | |
| Tako2g01265 | . | 1 | 575 | MAP Kinase gene family | AT3G14720 | 65.546 | 0.0 | 745.0 | |
| Tako2g03410 | . | 1 | 483 | MAP Kinase gene family | AT3G18040 | 84.124 | 0.0 | 818.0 | |
| Tako2g05475 | . | 90 | 424 | MAP Kinase gene family | AT1G73670 | 36.842 | 7.98e-58 | 197.0 | |
| Tako2g05476 | . | 90 | 424 | MAP Kinase gene family | AT1G73670 | 36.842 | 7.98e-58 | 197.0 | |
| Tako2g06776 | . | 22 | 311 | MAP Kinase gene family | AT5G19010 | 30.599 | 5.51e-30 | 123.0 | |
| Tako2g06777 | . | 22 | 311 | MAP Kinase gene family | AT5G19010 | 30.599 | 5.51e-30 | 123.0 | |
| Tako3g00075 | . | 79 | 122 | MAP Kinase gene family | AT2G43790 | 88.636 | 1.75e-17 | 82.0 | |
| Tako3g00196 | . | 90 | 424 | MAP Kinase gene family | AT1G73670 | 37.901 | 1.05e-58 | 199.0 | |
| Tako3g00197 | . | 90 | 424 | MAP Kinase gene family | AT1G73670 | 37.901 | 7.91e-59 | 198.0 | |
| Tako3g02346 | . | 361 | 486 | MAP Kinase gene family | AT3G18040 | 48.031 | 2.99e-30 | 112.0 | |
| Tako3g02366 | . | 1 | 370 | MAP Kinase gene family | AT1G10210 | 82.48 | 0.0 | 654.0 | |
| Tako3g03975 | . | 10 | 395 | MAP Kinase gene family | AT2G43790 | 88.918 | 0.0 | 691.0 | |
| Tako4g00863 | . | 4 | 370 | MAP Kinase gene family | AT3G45640 | 80.381 | 0.0 | 633.0 | |
| Tako4g00871 | . | 200 | 363 | MAP Kinase gene family | AT4G01370 | 73.939 | 4.97e-87 | 258.0 | |
| Tako4g01948 | . | 24 | 311 | MAP Kinase gene family | AT5G19010 | 30.53 | 2.11e-28 | 119.0 | |
| Tako4g01950 | . | 24 | 311 | MAP Kinase gene family | AT5G19010 | 30.53 | 2.11e-28 | 119.0 | |
| Tako4g01951 | ACH | 24 | 311 | MAP Kinase gene family | AT5G19010 | 30.53 | 2.11e-28 | 119.0 | |
| Tako4g02157 | . | 22 | 268 | MAP Kinase gene family | AT3G18040 | 33.984 | 9.75e-32 | 124.0 | |
| Tako4g03971 | . | 91 | 589 | MAP Kinase gene family | AT1G53510 | 60.994 | 0.0 | 600.0 | |
| Tako5g01284 | . | 1 | 113 | MAP Kinase gene family | AT3G45640 | 73.451 | 4.84e-57 | 179.0 | |
| Tako5g01657 | . | 155 | 245 | MAP Kinase gene family | AT2G43790 | 38.542 | 3.95e-11 | 58.5 | |
| Tako5g03792 | ACH | 23 | 311 | MAP Kinase gene family | AT5G19010 | 30.124 | 7.37e-29 | 120.0 | |
| Tako5g03793 | ACH | 23 | 311 | MAP Kinase gene family | AT5G19010 | 30.124 | 7.37e-29 | 120.0 | |
| Tako6g01698 | . | 9 | 281 | MAP Kinase gene family | AT3G18040 | 84.615 | 1.21e-177 | 498.0 | |
| Tako6g01699 | . | 9 | 281 | MAP Kinase gene family | AT3G18040 | 84.615 | 1.21e-177 | 498.0 | |
| Tako6g02220 | . | 1 | 363 | MAP Kinase gene family | AT2G18170 | 82.645 | 0.0 | 637.0 | |
| Tako7g00048 | . | 1 | 372 | MAP Kinase gene family | AT4G01370 | 85.484 | 0.0 | 684.0 | |
| Tako7g00116 | . | 152 | 367 | MAP Kinase gene family | AT3G59790 | 35.874 | 5.82e-45 | 153.0 | |
| Tako7g04309 | . | 1 | 363 | MAP Kinase gene family | AT1G10210 | 82.645 | 0.0 | 654.0 | |
| Tako8g00766 | . | 4 | 319 | MAP Kinase gene family | AT4G01370 | 77.215 | 0.0 | 520.0 | |
| Tako8g00767 | . | 4 | 376 | MAP Kinase gene family | AT4G01370 | 75.335 | 0.0 | 597.0 | |
| Tako8g00768 | . | 4 | 259 | MAP Kinase gene family | AT4G01370 | 80.859 | 7.54e-156 | 437.0 | |
| Tako8g00773 | . | 1 | 207 | MAP Kinase gene family | AT3G45640 | 82.609 | 2.56e-130 | 369.0 | |
| Tako8g02059 | . | 1 | 367 | MAP Kinase gene family | AT1G10210 | 77.657 | 0.0 | 621.0 | |
| Tako8g03710 | . | 9 | 473 | MAP Kinase gene family | AT5G19010 | 66.595 | 0.0 | 627.0 | |
| Tako8g03709 | . | 9 | 312 | MAP Kinase gene family | AT5G19010 | 80.263 | 6.75e-178 | 517.0 | |
| Tako8g05223 | . | 64 | 379 | MAP Kinase gene family | AT3G59790 | 35.329 | 1.41e-56 | 188.0 | |
| Tako8g05224 | . | 64 | 379 | MAP Kinase gene family | AT3G59790 | 35.329 | 1.41e-56 | 188.0 |
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| Tako | Pkinase | 2.2e-50 | CL0016 | PK | CMGC_MAPK |