AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tako4g03988 ATGGCTTCATTACAACTTCTTACCACCTTCACCACCACCGCCACCCCAAGAAAACAGCCAAATCCCACCTCCAGCCGCCGTTCCAAGACCTACCCCAAACAAACCCACCGCTTCAAAGTCTCATGCAACGTCGCAAAAGATGACAATGAGAACCTACTACTAGTCCCGGAATCCCAAAAACTTATACTTAATGTGGATCGGAGGAACTTGCTCCTTGGACTCAGCGGCGCCGGCCTTTACACCTCCCTTCCGGCGGCTTTCGCCGCCCCTATCACGACTCCAGATATCTCCACATGCATCCCGTCAGAATCAGAAGACACAACCACCCGGATTAGACCAGCGGCACATAGAGCCACCCCCGAGTACGTCGCCAAGTACAAAGCAGCAATCCAAGCCATGAGAGACCTCCCCGACGACCACCCACACAGCTTCGTCTCCCAAGCCAAAATCCATTGCGCTTACTGCAACGGCGGCTACACTCAAGTCGCGAAGAGAATCCTAGGGAAACTAATCGACGACCCCACTTTCGCGTTGCCGTACTGGAACTGGGATCATCCCGCCGGAATGACGCTCCCGGCGTTCTTCGAAAACGACGGGAAAAGAAACCCTGTGTTTGACGCGTACCGTAATGTTACCCATGTAACACCAACCGCGATTGTTGACCTTGACTACAATGGATCAGATAGCGGCGCTCCTTGTCTGCAACAAATAAACACAAATCTTACGGCGATGTATAAGCTGATGGTGAGTAACGCCGCCGACCCGTTGAGTTTCTTTGGCGGCGTGTATAAGGCCGGAGACGACCCGTTTGGAAACGGTGACCCGTCTGTCGGGTCGGTAGAATCTGGGTGTCATACCGCGATTCATAGATGGGTGGGGAATCCGAGAATGATGAACACTGAGGACATGGGGAACTTTTATTCCGCGGGGTATGACCCTGCGTTTTACGTCCACCATGCGAATGTTGACCGGATGTGGAAAGTTTGGAAGGATTTGGGTATTCCGGGGCACTCTGAACCTACGGATCCTGATTGGCTTAACGCATCGTTTGTGTTTTACGATGAAAACGAACAGCTTGTACGTGTATACAACAAAGATTGTGTCAATCTTGAAAACCTAAAATACGATTACGAATTATCCCCACTTCCATGGCTCAAGAACCGACCGGTCCCACATATCAAGACCCCAAACCCTGTCGACAATGCTGCTCCAGCTCCACCGGCTGTAAAGTTGCCGGAAGTTAAGTTCCCGGTGAAGCTGGACAAGACGGTGAAGGTGTATGATGATGCTCCGACAATCCTACTATCGGAAAGTGAGTTTGTAGGTAGTTTTGCGCAGTTGCCACATGGGCGTAGTGGCGGCCGTGGCCGTGGCCATGGCCATAGCAAGTTGATGACAAGTGCAGCAAGGTTCGGATTAACTGAGGTTTTGGAGGACATTGGCGCGGAGGATGATGAGTATATTTTGGTGACGTTGGTGCCTAAAGCGGGGAGCGAGGATCTCACCGTTGAAGAAATCACGGTGGAGTTGGTTCCTGTTAATCCTTGA 1548 51.61 MASLQLLTTFTTTATPRKQPNPTSSRRSKTYPKQTHRFKVSCNVAKDDNENLLLVPESQKLILNVDRRNLLLGLSGAGLYTSLPAAFAAPITTPDISTCIPSESEDTTTRIRPAAHRATPEYVAKYKAAIQAMRDLPDDHPHSFVSQAKIHCAYCNGGYTQVAKRILGKLIDDPTFALPYWNWDHPAGMTLPAFFENDGKRNPVFDAYRNVTHVTPTAIVDLDYNGSDSGAPCLQQINTNLTAMYKLMVSNAADPLSFFGGVYKAGDDPFGNGDPSVGSVESGCHTAIHRWVGNPRMMNTEDMGNFYSAGYDPAFYVHHANVDRMWKVWKDLGIPGHSEPTDPDWLNASFVFYDENEQLVRVYNKDCVNLENLKYDYELSPLPWLKNRPVPHIKTPNPVDNAAPAPPAVKLPEVKFPVKLDKTVKVYDDAPTILLSESEFVGSFAQLPHGRSGGRGRGHGHSKLMTSAARFGLTEVLEDIGAEDDEYILVTLVPKAGSEDLTVEEITVELVPVNP 515
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tako4g03988 515 Pfam Common central domain of tyrosinase 163 331 IPR002227 GO:0016491(InterPro)
Tako4g03988 515 Pfam Polyphenol oxidase middle domain 340 389 IPR022739 GO:0004097(InterPro)
Tako4g03988 515 PANTHER TYROSINASE FAMILY MEMBER 92 478 IPR050316 -
Tako4g03988 515 Gene3D - 87 379 IPR008922 -
Tako4g03988 515 SUPERFAMILY Di-copper centre-containing domain 104 384 IPR008922 -
Tako4g03988 515 ProSitePatterns Tyrosinase and hemocyanins CuB-binding region signature. 312 323 IPR002227 GO:0016491(InterPro)
Tako4g03988 515 PRINTS Tyrosinase copper-binding domain signature 178 183 IPR002227 GO:0016491(InterPro)
Tako4g03988 515 PRINTS Tyrosinase copper-binding domain signature 284 295 IPR002227 GO:0016491(InterPro)
Tako4g03988 515 PRINTS Tyrosinase copper-binding domain signature 311 329 IPR002227 GO:0016491(InterPro)
Tako4g03988 515 MobiDBLite consensus disorder prediction 8 29 - -
Tako4g03988 515 MobiDBLite consensus disorder prediction 8 34 - -
Tako4g03988 515 Pfam Protein of unknown function (DUF-B2219) 416 510 IPR022740 GO:0004097(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tako4g03988 K00422 polyphenol oxidase [EC:1.10.3.1]