AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tako4g04137 ATGGCTACACAAATCAGTCCCTGTTCTTCATCTTCCACCACCTTCTCACCTTCTTCCCTCAATCAAGAAACGTTTTCCTCTGCAAAATTCTTCAATTTCTCAAGAAAATCATCTCCCTCGAAATGGGCTTTCAAAATCAGTCCGAAAAACCAGTTTGAGCTCAAATCCTCAAATGGGTATCCTCTTAATGCGGTTTCTTTACACGATGGTGCAGCAGAGAAGCCTCTAGCGAAAGAACATTTGCCACCACCAAAACAATCGGAATCCCATCTTACTGTGACTGTCGTCGGTGCTTCCGGCGATCTCGCCAAGAAAAAAATCTTTCCGGCCCTTTTTGCTCTCTTTTACGAGGGTTGTTTACCTCAGAATTTTACCATATTTGGCTATGCCCGAACCAAAATGACCGATGACGAGTTAAGAGAGATGATTAGTAGTACGTTAACTTGCAGAATCGATAAAAGAGAGAACTGTGGTGACAAAATGGAAGAGTTTCTTCAAAGATGTTTTTACCATTCGGGTCAATACAGCTCCGAGGAACATTTTGCTGAATTGGACCTTAAGTTGAAGCAAAAAGAGGGTGGAAAAGTGTCGAATAGATTGTTTTATTTGTCAATACCACCAAACATTTTTGTGGATGTGGCACGTTGTGCGAGTGGTAGGGCTTCTTCCAAGAACGGGTGGACAAGGGTAATTGTGGAAAAACCATTTGGTCGTGACTCAGAATCGTCTGGAGAGCTAACAAGAAGCCTCAAGAAGTACTTAGACGAGGATCAAATCTTCAGGATTGATCATTACTTAGGGAAGGAACTAGTGGAGAATTTATCCGTCCTTCGTTTTTCAAATCTTGTTTTTGAGCCACTTTGGTCAAGAAACTACATTCGCAATGTACAATTCATATTTTCAGAAGACTTCGGTACCGAAGGAAGAGGAGGATACTTTGACAACTATGGAATCATTCGTGACATAATGCAAAACCACCTCCTACAAATACTAGCACTATTTGCAATGGAAACACCCGTCACTTTAGATGCCGAGGATGTTAGAAACGAAAAGGTTAAAGTTTTGAGATCGATGAGACAGCTAAAGCTAGAAGATGTAATCGTGGGCCAATATAAAGGCCATAGCAAGGGTGGAAAGTCGTATTTAGGGTACACAGATGATCCAACGGTGCCGAATAACAGCGTCACTCCAACTTTTGCGGCCGCCGCCCTGTTTATAGATAATGCCCGGTGGGATGGTGTCCCGTTTCTTATGAAAGCCGGCAAGGCTCTGCATACTAGACGGGCGGAGATCAGAGTTCAATTCAGACATGTTCCGGGTAATCTGTACAAAAGAAACTTTGGGATGGATTTGGATAAGGCTACGAACGAGCTCGTGCTTCGCGTCCAGCCTGACGAAGCCATATATCTGAAAATCAATAATAAAATTCCGGGACTTGGGATGAGGTTTGATCGGAGTGATCTTAATTTGCTCTACAGCGCGAGGTATCCTAAGGAAATTCCGGATGCATACGAGAGGCTTCTGTTGGATGCGATTGAAGGAGAAAGGAGATTGTTTATAAGAAGCGATGAACTTGATGCTGCTTGGGCTATATTCACGCCGTTGCTGAAAGAACTGGAGGGGAAGAAGATCTCACCGGAGTTGTATCCTTATGGCAGCAGAGGACCTGTCGGTGCTCATTATTTGGCGGCAAAATATGATGTCCGGTGGGGAGATCTTGCGGAGTGA 1728 43.75 MATQISPCSSSSTTFSPSSLNQETFSSAKFFNFSRKSSPSKWAFKISPKNQFELKSSNGYPLNAVSLHDGAAEKPLAKEHLPPPKQSESHLTVTVVGASGDLAKKKIFPALFALFYEGCLPQNFTIFGYARTKMTDDELREMISSTLTCRIDKRENCGDKMEEFLQRCFYHSGQYSSEEHFAELDLKLKQKEGGKVSNRLFYLSIPPNIFVDVARCASGRASSKNGWTRVIVEKPFGRDSESSGELTRSLKKYLDEDQIFRIDHYLGKELVENLSVLRFSNLVFEPLWSRNYIRNVQFIFSEDFGTEGRGGYFDNYGIIRDIMQNHLLQILALFAMETPVTLDAEDVRNEKVKVLRSMRQLKLEDVIVGQYKGHSKGGKSYLGYTDDPTVPNNSVTPTFAAAALFIDNARWDGVPFLMKAGKALHTRRAEIRVQFRHVPGNLYKRNFGMDLDKATNELVLRVQPDEAIYLKINNKIPGLGMRFDRSDLNLLYSARYPKEIPDAYERLLLDAIEGERRLFIRSDELDAAWAIFTPLLKELEGKKISPELYPYGSRGPVGAHYLAAKYDVRWGDLAE 575
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tako4g04137 575 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 88 276 IPR036291 -
Tako4g04137 575 Coils Coil 344 364 - -
Tako4g04137 575 Pfam Glucose-6-phosphate dehydrogenase, C-terminal domain 276 570 IPR022675 GO:0004345(InterPro)|GO:0006006(InterPro)|GO:0050661(InterPro)
Tako4g04137 575 NCBIfam glucose-6-phosphate dehydrogenase 92 571 IPR001282 GO:0006006(InterPro)|GO:0016614(InterPro)|GO:0050661(InterPro)
Tako4g04137 575 ProSitePatterns Glucose-6-phosphate dehydrogenase active site. 263 269 IPR019796 GO:0004345(InterPro)|GO:0006006(InterPro)
Tako4g04137 575 Hamap Glucose-6-phosphate 1-dehydrogenase [zwf]. 90 572 IPR001282 GO:0006006(InterPro)|GO:0016614(InterPro)|GO:0050661(InterPro)
Tako4g04137 575 PRINTS Glucose-6-phosphate dehydrogenase signature 229 242 IPR001282 GO:0006006(InterPro)|GO:0016614(InterPro)|GO:0050661(InterPro)
Tako4g04137 575 PRINTS Glucose-6-phosphate dehydrogenase signature 323 339 IPR001282 GO:0006006(InterPro)|GO:0016614(InterPro)|GO:0050661(InterPro)
Tako4g04137 575 PRINTS Glucose-6-phosphate dehydrogenase signature 305 322 IPR001282 GO:0006006(InterPro)|GO:0016614(InterPro)|GO:0050661(InterPro)
Tako4g04137 575 PRINTS Glucose-6-phosphate dehydrogenase signature 410 436 IPR001282 GO:0006006(InterPro)|GO:0016614(InterPro)|GO:0050661(InterPro)
Tako4g04137 575 PRINTS Glucose-6-phosphate dehydrogenase signature 253 281 IPR001282 GO:0006006(InterPro)|GO:0016614(InterPro)|GO:0050661(InterPro)
Tako4g04137 575 MobiDBLite consensus disorder prediction 1 20 - -
Tako4g04137 575 FunFam Glucose-6-phosphate 1-dehydrogenase 262 571 - -
Tako4g04137 575 Gene3D Dihydrodipicolinate Reductase; domain 2 262 571 - -
Tako4g04137 575 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD 87 569 IPR001282 GO:0004345(PANTHER)|GO:0006006(PANTHER)|GO:0006006(InterPro)|GO:0009051(PANTHER)|GO:0009570(PANTHER)|GO:0016614(InterPro)|GO:0050661(InterPro)
Tako4g04137 575 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 263 570 - -
Tako4g04137 575 Gene3D - 86 261 - -
Tako4g04137 575 Pfam Glucose-6-phosphate dehydrogenase, NAD binding domain 95 273 IPR022674 GO:0006006(InterPro)|GO:0016614(InterPro)|GO:0050661(InterPro)
Tako4g04137 575 PIRSF G6PD 78 574 IPR001282 GO:0006006(InterPro)|GO:0016614(InterPro)|GO:0050661(InterPro)
Tako4g04137 575 FunFam Glucose-6-phosphate 1-dehydrogenase 87 261 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tako4g04137 K00036 glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]