AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tako4g04140 ATGTCAACGACCTCGTCTTCTTCGTCACAGGACGGAGGAGACGGTGGAAATGGCGGTGGTGGAGAGTTCGAAGGACCGTCGCATTCTCGTCAACGCTTCAACCACGCTGTATGGCCGGAGCCTTTCCTCGAAGCTTTAGCTACTCAAATCGCTATCGACGCCGCGCGCACATTTGGCCGCCTCGCCGTTGCTCCTGCTCTCACGAATCTCTTCCAGGTTTGTAGAACATGGCGAACTGTATCTCAGTCTGACCTCCTATGGCAAACCCTAACCCGACGAATCTGGCATCGCAACAACCTCCTCCACCCAACATGGCACGACGAATACATTTACCGCCACCGAACCGCCACAAACTTCCGTCGCCGGCGTTATATCTACACCACACTCCACTTCCCTCCAAACGAAAACAACACAAACGAAAGCCTCTCATGCCACCGCCTCGCCATCTCCGACTACCACCTCGCTGCAGGCTTTTCCGATGGCTCAGTCTGTCTGTTCCACCTCCCGACAAGGCTCCACGTCTCCACCTTCCACCCACACCAACGTAACCATCTCGGCCCCTTCTCCCGCGCCGTCTGTGGCTTATTCTTCTCAGATAACCGCCTAATCTTCGCCTCCCTCGACGGCGACATCCACGTCGCGTCCGTCAACGTTCCCGGCGCCACAAGGCGTGCACACTTAGGCGACGTCGTGACCGATGGCGTACTCGTCGATTTCGCCGGTTGTAACCAGTGGTGGGTCGGCCTTTACGCAGGTATTCCAAATCGTGCATTTCACGTACGAAACGGTACCACAGAAGAACTCGTATTCATCGGCGGCACATTAACCGACCCGGACGCCGTAATCGGGTGGCACCTACTCACCGATCTGAGAGAACACGTTGGCCGGATCCGAATCGCAAGTCAAGATCTAGCGGTAGATGATATTAGGAGAAGAGGATTTCGCGAGACGAATAAACGTAGGGGCAGCTGA 972 55.86 MSTTSSSSSQDGGDGGNGGGGEFEGPSHSRQRFNHAVWPEPFLEALATQIAIDAARTFGRLAVAPALTNLFQVCRTWRTVSQSDLLWQTLTRRIWHRNNLLHPTWHDEYIYRHRTATNFRRRRYIYTTLHFPPNENNTNESLSCHRLAISDYHLAAGFSDGSVCLFHLPTRLHVSTFHPHQRNHLGPFSRAVCGLFFSDNRLIFASLDGDIHVASVNVPGATRRAHLGDVVTDGVLVDFAGCNQWWVGLYAGIPNRAFHVRNGTTEELVFIGGTLTDPDAVIGWHLLTDLREHVGRIRIASQDLAVDDIRRRGFRETNKRRGS 323
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tako4g04140 323 SUPERFAMILY F-box domain 67 115 IPR036047 GO:0005515(InterPro)
Tako4g04140 323 Gene3D - 72 247 IPR015943 GO:0005515(InterPro)
Tako4g04140 323 MobiDBLite consensus disorder prediction 1 30 - -
Tako4g04140 323 PANTHER WD40 REPEAT PROTEIN 12, 37 21 306 - -
Tako4g04140 323 SUPERFAMILY WD40 repeat-like 138 223 IPR036322 GO:0005515(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tako4g04140 - -
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Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
Tako None None None TF SAP