AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tako4g04153 ATGAATTCAACACTTCTCAGAACATCACCATTCATCCATTGTTGTCGCCCTTTACGCTCTTCAAGAATTCCGGAGCTCTTTCCCCCCTTTCGGTACCATATCAATTCGAAAACATTATGGAAACAAAAGCTTCAGATTTCACGACGCTCCAATTTCTTTATCACCAAAGTATACCCCAAGAATTCCGTAGCCAGAGAAATTGTACCCGAAGAATCTACCCAAGATTCGTCAAGAAAAGAGGATTTCGAGAAGTTTGGGGGTTTATTGAGATGCGGATTACTTCTCGGTTTGTTGGTTTTGGGGGTAATTCGATGTCAAAAAGCTCTCGCATTGGATGCTGGTAGCGATTTAGGGGTTTTGACACAGACGGCTATTGTTCACACGCAAGGTTTCTGGAACAACCCCAAAATTCCACAGATTTTCCGAGTTTTCAGAGAACAAGGTTTGATTTTAGCTGCACTTCTGGGCTTATCCGCCTTCTTTTCCATGGCCGAAACTTCAATCACCACTCTTTCACCTTGGAAGGTCAGAGAGCTAGCTGAAAAAGAAGACGAAAATGGCGTCTTCAAGCTCCTTCGTACTGATATCACACGATTCCTCACCACCATTCTCATCGGCACAACTGTGGTGAACATCGGAGCTACTGCACTTTTCACAGAAGCAGCCACTACAGTTTTTGGGGAAGCTGGTGTTAGTGCTGCAACTGGTGTCATGACTGTTGTTGTTTTACTTCTCACTGAAATTACCCCCAAAAGTATAGCTGTTCATAATGCAACTGCAGTTGCTAGGGCTGTGGTTAGGCCAGTTGCATGGCTCTCAATTGTTCTATATCCAGTTGGAAGAGTTGTAACCTTTCTTTCAATGGGAATGCTTAAAATTCTTGGTTTAAAAGGGAAAAGTGAACCATCTGTGACAGAAGATGAACTCAAGTTGATGTTGAGGGTTGCTAATTTAAGTGGGGCCATTGAGGAAGAAGAACAAGATATGATTGAAAATGTGTTGGAAATAAAAGACACCCATGTGAAAGAGGTTATGACTCCTCTTGTAGATGTGGTTGCAGTTGATTTTGGTGCAACATTACTTGATTTTCATCACTTATGGGTCACTAATCAATATTCTAGGGTGCCAGTATTTGAGCAGAGAATCGATAACATTGTGGGTGTGGCTTATGCAATGGATTTGTTGGATCTTGTTCAAAAAGGAGAGATGCTAGAAACTGCTGTGGTGGGAGAGATTGCTCACAAGCCTGCGTATTTTGTTCCTGATTCAATGTTGGTTTGGAATCTTCTGAGGGAATTTCGCATCCGGAAGGTTCACATGGCGGTTGTCCTTAATGAATATGGAGGAACAGTGGGAATTGTAACCCTCGAGGACGTGGTCGAAGAAATTGTCGGTGAAATCTTCGATGAAAATGACTCAAAGGAGGAAATTGATAGAAAAACAGGGAATATTGTAAAGGTAGGAGATGGAGTGTTTGATGTTGATGCAAATACATCAATTGACCAACTTTCTGAAGATTTGGAAATTATTTTGCCAGAGGATCACCAATATGAAACGGTTTCGGGTTTTATATGTGAAGCATTTGGATATATACCAAGAACAGGTGAAAGTGTTAAAGTAATTTTGCAAAAAACCATTGAAGAAGATGGTGATGAGAGCAAACAAGAAAATGAAAGTCAAGATCCGAAAGATAAATCTCAAACATTTAAGCTCGAGATATTGTCTGGAAATTGTAGAAAAGTAAACACCGTACGATTTGAAAGAATCAACAATCATTCAGCAAAAGAAATCAAAGAAGCCGCCCGCCTTGTCCCCAGATTTTGGAAAACAAATTGGAGAAATGACGAAAATTCATCCACCAATAGTGATGATGAAAGAGGAGGCTACCATCAAAATGAAAATGAAAATGAAACAACCACCATTGATATCATTAACAATCAATAA 1944 40.33 MNSTLLRTSPFIHCCRPLRSSRIPELFPPFRYHINSKTLWKQKLQISRRSNFFITKVYPKNSVAREIVPEESTQDSSRKEDFEKFGGLLRCGLLLGLLVLGVIRCQKALALDAGSDLGVLTQTAIVHTQGFWNNPKIPQIFRVFREQGLILAALLGLSAFFSMAETSITTLSPWKVRELAEKEDENGVFKLLRTDITRFLTTILIGTTVVNIGATALFTEAATTVFGEAGVSAATGVMTVVVLLLTEITPKSIAVHNATAVARAVVRPVAWLSIVLYPVGRVVTFLSMGMLKILGLKGKSEPSVTEDELKLMLRVANLSGAIEEEEQDMIENVLEIKDTHVKEVMTPLVDVVAVDFGATLLDFHHLWVTNQYSRVPVFEQRIDNIVGVAYAMDLLDLVQKGEMLETAVVGEIAHKPAYFVPDSMLVWNLLREFRIRKVHMAVVLNEYGGTVGIVTLEDVVEEIVGEIFDENDSKEEIDRKTGNIVKVGDGVFDVDANTSIDQLSEDLEIILPEDHQYETVSGFICEAFGYIPRTGESVKVILQKTIEEDGDESKQENESQDPKDKSQTFKLEILSGNCRKVNTVRFERINNHSAKEIKEAARLVPRFWKTNWRNDENSSTNSDDERGGYHQNENENETTTIDIINNQ 647
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tako4g04153 647 ProSiteProfiles CBS domain profile. 413 470 IPR000644 -
Tako4g04153 647 MobiDBLite consensus disorder prediction 612 647 - -
Tako4g04153 647 MobiDBLite consensus disorder prediction 618 632 - -
Tako4g04153 647 FunFam Magnesium-cobalt efflux protein CorC 322 472 - -
Tako4g04153 647 Pfam Transporter associated domain 486 588 IPR005170 -
Tako4g04153 647 Gene3D - 480 592 IPR016169 -
Tako4g04153 647 ProSiteProfiles CNNM transmembrane domain profile. 140 326 IPR002550 -
Tako4g04153 647 SUPERFAMILY FAD-binding-transporter-associated domain-like 483 596 IPR036318 GO:0050660(InterPro)
Tako4g04153 647 Gene3D - 320 475 IPR046342 -
Tako4g04153 647 MobiDBLite consensus disorder prediction 548 567 - -
Tako4g04153 647 CDD CBS-pair-CorC-HlyC-assoc 340 461 IPR044751 -
Tako4g04153 647 Pfam CBS domain 409 464 IPR000644 -
Tako4g04153 647 Pfam CBS domain 341 398 IPR000644 -
Tako4g04153 647 SMART CorC-HlyC-2 485 590 IPR005170 -
Tako4g04153 647 Pfam Cyclin M transmembrane N-terminal domain 149 326 IPR002550 -
Tako4g04153 647 PANTHER HEMOLYSIN-RELATED 123 617 - -
Tako4g04153 647 SUPERFAMILY CBS-domain pair 328 467 IPR046342 -
Tako4g04153 647 ProSiteProfiles CBS domain profile. 345 406 IPR000644 -
Tako4g04153 647 MobiDBLite consensus disorder prediction 633 647 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tako4g04153 K03699 magnesium and cobalt exporter, CNNM family