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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tako4g04184 ATGTCGTTGGCCGTTGAAGCTGTTTCCAGTTCCACTAACATGGGACTCGAAGAAAATAAAGAAAAGAAAACTGAAATTGAAGATAATGGAGATGAAAAAGGAAGCGAATCCTCCATTTATGAAACCGAAGATGAAGGAGAAGATTCACAGACTCCTAAAATCGACTTGGGTCCTCAATTCACCCTCAAAGAACAATTCGAGAAAGACAAGGATGACGAGAGTCTCAGAAAATGGAAAGAACAGCTACTTGGTAACGTCGACATTAACACCGTTGGAGAATCACTAGAGCCAGAAGTGAAGATCATCAGTCTTTCCATACTATCTCCAGGGAGATCCGACATTGTTCTTGCGATACCCGAAGATGGAAAACCGAATGGCCCATGGTTTACTTTAAAAGAAGGAAGTCGTTACAGTTTACGATTCTCATTTCAAGTTTGCCGTAACATAGTTTCAGGTTTAAAGTACACCAATAACGTATGGAAAACCGGCGTCAAGGTGGATGGCGTGAAACAGATGCTTGGTACTTTTAGTCCCCAACAAGAAGCATACACTTATGACATGCCAGAAGAGACCACCCCTTCTGGTTATTTTGCAAGAGGATCTTATTCTGCAAAAACTAAGTTTGTTGATGATGATGGCAAATGTTACTTGGAGATCAACTATACGTTTGACATAAGGAAAGATTGGGGGAGTGTTGAAACGACTAAAACGCCATGA 717 41.0 MSLAVEAVSSSTNMGLEENKEKKTEIEDNGDEKGSESSIYETEDEGEDSQTPKIDLGPQFTLKEQFEKDKDDESLRKWKEQLLGNVDINTVGESLEPEVKIISLSILSPGRSDIVLAIPEDGKPNGPWFTLKEGSRYSLRFSFQVCRNIVSGLKYTNNVWKTGVKVDGVKQMLGTFSPQQEAYTYDMPEETTPSGYFARGSYSAKTKFVDDDGKCYLEINYTFDIRKDWGSVETTKTP 238
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tako4g04184 238 FunFam Rho GDP-dissociation inhibitor 1 52 231 - -
Tako4g04184 238 MobiDBLite consensus disorder prediction 1 58 - -
Tako4g04184 238 SUPERFAMILY E set domains 36 230 IPR014756 -
Tako4g04184 238 Gene3D Coagulation Factor XIII, subunit A, domain 1 52 231 IPR024792 -
Tako4g04184 238 MobiDBLite consensus disorder prediction 1 15 - -
Tako4g04184 238 PRINTS RHO protein GDP dissociation inhibitor signature 149 165 IPR000406 GO:0005094(InterPro)|GO:0005515(InterPro)|GO:0005737(InterPro)|GO:0007266(InterPro)
Tako4g04184 238 PRINTS RHO protein GDP dissociation inhibitor signature 182 194 IPR000406 GO:0005094(InterPro)|GO:0005515(InterPro)|GO:0005737(InterPro)|GO:0007266(InterPro)
Tako4g04184 238 PRINTS RHO protein GDP dissociation inhibitor signature 208 225 IPR000406 GO:0005094(InterPro)|GO:0005515(InterPro)|GO:0005737(InterPro)|GO:0007266(InterPro)
Tako4g04184 238 PRINTS RHO protein GDP dissociation inhibitor signature 166 181 IPR000406 GO:0005094(InterPro)|GO:0005515(InterPro)|GO:0005737(InterPro)|GO:0007266(InterPro)
Tako4g04184 238 Pfam RHO protein GDP dissociation inhibitor 42 228 IPR000406 GO:0005094(InterPro)|GO:0005515(InterPro)|GO:0005737(InterPro)|GO:0007266(InterPro)
Tako4g04184 238 PANTHER RHO GDP-DISSOCIATION INHIBITOR 32 229 IPR000406 GO:0005094(InterPro)|GO:0005094(PANTHER)|GO:0005515(InterPro)|GO:0005737(InterPro)|GO:0005829(PANTHER)|GO:0007266(InterPro)|GO:0007266(PANTHER)|GO:0016020(PANTHER)
Tako4g04184 238 MobiDBLite consensus disorder prediction 16 51 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tako4g04184 K12462 Rho GDP-dissociation inhibitor
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Event-related genes

Select Gene_1 Gene_2 Event_name
163820 Tako2g00177 Tako4g04184