AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tako4g04253 ATGATATTCTCCATGACAATTACAACCCCAAGCTTCCCATCTCTACCCCCATTTCACCATTCCAGCTCCCTCCCGCCTTCCTACAAACACCCACCTATCACAATTCATCAAAACCCAGCAAAACCCCATGACAATTCCATAAAATCCCTAAAAAATTCCGGGTTTTTATCAGCAATCGGGAACGCAATTGAAGAACAAGAGTATCGAAAAGCTAGGGCTGAGGTTATCCGAAAAGGTACAGGGTTAGAGGGGTATACAATCGAGGGTCTTTCAATTGGGGGTCATGAAACTTGTGTTATTGTTCCCGAATTGAAGTGCGCTTTTGATATCGGAAGGTGTCCTGCTAGAGCAGTCGCCATGAATTTCTTGTTCATTACTCATGCGCATCTTGATCACATTGGTGGGCTACCGATGTACGTAGCGACTCGTGGTTTATACAGCTTGACTCCTCCGACTGTATTTGTTCCTCCTGCCATTAAAGACGATGTTGAAAATTTGATCGAGCTTCATAGGAAGATGGGAAATGTGGAGTTAAATCTTGATTTGGTTGCATTGGATGTAGGAGAAACATACGAGTTACGAAATGACCTTGTTGTACGCCCATTTAAAACTCACCACGTCATACCCAGTCAGGGTTACGTTATTTACTCGGTTCGCAAGAAGCTAAAAAAGCAATACACGCATCTGAAAGGAAGAGAAATTGAGAAAAAGAAGAAATCTGGAGTCGAGATTACGGATATTATATTGTCCCCGGAGATAGCATTCACCGGAGATACAAGTTCCGAGTTTCTACTCGATCCAAGAAGTTCCGATGCCTTAAGGGCAAAAGTTCTCATCACTGAGGCGACTTTTTTAGACGACAAATGCGACATTGGTTATGCACAAGCGCATGGTCACATGCATATCGACGAGATTACAGAGCATGCCAAGTGGATCCGAAACAAAACCGTTCTTTTGACTCATTTTTCGTCACGCTACCATATCGAGGAAATTCGTCAAGCTGTGACAAAATTGCAATCAAAGGTTTCAGCTAAAGTTGTGCCTCTCACGGAAGGTTTTAGATCAATGTACACATCATAG 1080 42.96 MIFSMTITTPSFPSLPPFHHSSSLPPSYKHPPITIHQNPAKPHDNSIKSLKNSGFLSAIGNAIEEQEYRKARAEVIRKGTGLEGYTIEGLSIGGHETCVIVPELKCAFDIGRCPARAVAMNFLFITHAHLDHIGGLPMYVATRGLYSLTPPTVFVPPAIKDDVENLIELHRKMGNVELNLDLVALDVGETYELRNDLVVRPFKTHHVIPSQGYVIYSVRKKLKKQYTHLKGREIEKKKKSGVEITDIILSPEIAFTGDTSSEFLLDPRSSDALRAKVLITEATFLDDKCDIGYAQAHGHMHIDEITEHAKWIRNKTVLLTHFSSRYHIEEIRQAVTKLQSKVSAKVVPLTEGFRSMYTS 359
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tako4g04253 359 Pfam Beta-lactamase superfamily domain 119 322 IPR001279 -
Tako4g04253 359 SUPERFAMILY Metallo-hydrolase-oxidoreductase 119 336 IPR036866 -
Tako4g04253 359 Gene3D - 85 354 IPR036866 -
Tako4g04253 359 PANTHER TRNASE Z TRZ1 44 353 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tako4g04253 K00784 ribonuclease Z [EC:3.1.26.11]