AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tako4g04270 ATGGATGCGATACTTTGGAAGATTAACATGGCCCCGCATGTCAGAATTGATTATTTCAAATTTCCTTTCCAAGGACTCCAGATTGTTCCTAATGATGCTTCAAAACTTGCTGACTTTCAAACAACAAGACAACTCACAAATAATTTTGAGACATCACTTAAAGAAGTCATGTTCATATCTCCTGGAAAAGATGAAAGGCTGACCAATTTTGCTGATAATGTTGAAATCCACTTTGCAATGAGGAAAAAGGTTGAGATTTTATCAACAGCTAGAGACCTTCTTCTTCATTCAGATTTCAATCTCCCTAAAGCGATTGATGGTGCGGATGGATTCCAAAACACACATCAACCAAAAAGACACGAATCAGCAAAATTCAGTATCGATCAGGTCGCTTTCATTCTTGAAAAAGTCCGCATAATATGGGAGCCACTTTTGCTTCCTTTCACATACAAACAAAGCATGTCAACCGTTTTGGAGGCTGTTTCTTCTAGAATCACCAAAGACATACTCATGTTAGACGACATTGCAGCAGAAGAAACCCTCCAGGCTAATTCATATGCTACTGGAAAACCTCTCTTCTTTAACGGAATCACTTATCGCCATCAAACAAACAGCAAAACAACAAAAGGACACGTCATCGGTCTCTGTTAA 651 38.71 MDAILWKINMAPHVRIDYFKFPFQGLQIVPNDASKLADFQTTRQLTNNFETSLKEVMFISPGKDERLTNFADNVEIHFAMRKKVEILSTARDLLLHSDFNLPKAIDGADGFQNTHQPKRHESAKFSIDQVAFILEKVRIIWEPLLLPFTYKQSMSTVLEAVSSRITKDILMLDDIAAEETLQANSYATGKPLFFNGITYRHQTNSKTTKGHVIGLC 216
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tako4g04270 216 Gene3D - 94 196 IPR046362 -
Tako4g04270 216 Pfam Centromere-kinetochore protein zw10, middle domain 28 94 IPR048344 -
Tako4g04270 216 PANTHER CENTROMERE-KINETOCHORE PROTEIN ZW10 101 185 - GO:0006888(PANTHER)|GO:0007094(PANTHER)|GO:1990423(PANTHER)
Tako4g04270 216 Pfam ZW10 C-terminal helical domain 126 182 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tako4g04270 K11578 protein transport protein DSL1/ZW10