AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tako4g04296 ATGGATTCTACAAATTCTAATGATAACATCGGCGGAGGAATGAATGTGGAAGAGCTAGATCATGCTCTTAGGGTGGAAATGGCATCCACCGACGGTTCGGATTTAGGTTCGGAGGATCATATAGCACCTCTTTTGACGCAGCCGGAGAACCCCCCGCTCAATATCTTCTCTGTCTCATACCCTAAACGGAAAACTAACAAGGACCAAATTTCGAGATTAATTGAACCGGAACCTTCACCGTTTAATCAGTTCATAATGTGGTCATGGAGTGGATCTAGATATTCTGGTTTGGTATGCATGGCCTTATCGTCTTCCATCTACTGTTTCATGGGAATCATGTCCGATGTATTCTCCGCTCAAGCAATTCCTCTTTTTGAGATAGCATTTGCAAGATGCATAATAATCTCAGCATTATCATTCATATGGTTAAGAAGAACCACACAACCAATTTTCGGACCTCCAAATGTCAGGAGTCTGTTTCTTTTAAGAGCTGTAACCGGCTGTATTTCTTTGATTACTTTCATTTACAGCATTCAAAGGTTACCATTCTCTCTAGCCATGTTATTGAGCTTTACAACTCCATTAATGGCTTCAATATCTGCAAAATTCATTCTCCATGAGGATTTCACTCTTTCAGAAATAGCAGCCATTGTTTCCAGTTTCTTTGGTGCAATCTTTATCATCAGATCAACTGTCAGCGTGCAAGGTACAGAAGAAGGTCAACAAGTACATGGAATACATTACTTTTATGTGTTTCTGATTGGTTTATTGTCATCATTGAGTGGTGGAATGAGTTATTGTTTTATAAGAGCTGGAGCAAATCAGTCTGATCAACCTGTGGTGACTATATTTTCATTTGGTTTACTATCTTGTCCTGCTGCAGCAATATGCATGATCACATTTGATGATTTTGTGGTGCCTAGCTTTCATTCTTTCATTCTTATGGTCATACTTGCCATTTTGGCATTCATTGCTGAGCTGTTTCTCGCACGTGGGCTTCAACTTGAGAAAACTAGCAAAGTTGCAAATATTCAATACATTGAGGTGGCATTATCCCAATTACTGGGCCTAGTAACATCAAGATTAACCCCTTCATTTGGTGGAATTGTTGGATTCTTCATCATATTTATATCGACTTCTTGTACTATGTATTTAGGGCCGGAAAAAGACATGGAGTAA 1179 39.27 MDSTNSNDNIGGGMNVEELDHALRVEMASTDGSDLGSEDHIAPLLTQPENPPLNIFSVSYPKRKTNKDQISRLIEPEPSPFNQFIMWSWSGSRYSGLVCMALSSSIYCFMGIMSDVFSAQAIPLFEIAFARCIIISALSFIWLRRTTQPIFGPPNVRSLFLLRAVTGCISLITFIYSIQRLPFSLAMLLSFTTPLMASISAKFILHEDFTLSEIAAIVSSFFGAIFIIRSTVSVQGTEEGQQVHGIHYFYVFLIGLLSSLSGGMSYCFIRAGANQSDQPVVTIFSFGLLSCPAAAICMITFDDFVVPSFHSFILMVILAILAFIAELFLARGLQLEKTSKVANIQYIEVALSQLLGLVTSRLTPSFGGIVGFFIIFISTSCTMYLGPEKDME 392
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tako4g04296 392 PANTHER ACYL-MALONYL CONDENSING ENZYME-RELATED 86 383 - GO:0016021(PANTHER)
Tako4g04296 392 Pfam EamA-like transporter family 96 228 IPR000620 GO:0016020(InterPro)
Tako4g04296 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 131 230 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tako4g04296 - -