AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tako4g04338 ATGGCTTCAAGTTCCGAAATAGGGCTTGCAGCTACCATAAACATCCTCACCGCATTTGCCTTTCTGGTTGCATTTGCCATACTTCGAATCCAGCCTTTCAACGATAGAGTTTACTTCCCGAAATGGTACCTAAGGGGTCTAAGGAACAATCCACTTCAATCAGGCGCATTCGTGCAGAAGTTTGTGAACTTGGATTTCAGATCATACTTGAAGTTCCTCAATTGGATGCCTGCTGCATTACGCATGCCAGAGCCTGAGCTAATCGATCACGCTGGATTAGACTCTGTTATCTACTTGAGAATTTACTTAACCGGACTCAAGATCTTTGTACCGATTGCATGCCTAGCTTTCACTGTTATGGTGCCAGTCAATTTTACTAATAAAACTTTGGAGGAATCTAAATTAACATATAGTGACATAGACAAGCTTTCCATATCCAACATTCCCACTGGATCAAACAGGTTCTTTACACATTTAGTCATGGCGTACGCCTTTACCTTTTGGACGTGTTATATTTTAAAAAGAGAATACGAGAAAGTTGCAACAATGAGATTGCATTTTATCTCATCAGAACACCGAAGACCCGATCAATTCACTGTATTGGTCAGAAATGTTCCCCCAGACCCTGACGAGTCGGTCAACGAACTAGTGGAACACTTTTTTCTAGTCAACCATCCCGATAACTATCTATCTCATCAGGTTGTTTACAATGCGAACGTGCTCTCTGATTTGGTAAACGAGAAGAAAACGAAGCAAAATTGGCTTGACTATTATCAACTCAAATATAACAGAAGTAACCAGTCAAAAAGACCATCAGTAAAGACTGGTTATCTTGGCTTATGGGGAAAGAAGGTGGATGCTATTGAGTATTATGAATCGGAGGTCGAGAAGCTATCGAAAAAAATATGTAAAGAGAGGGAAAAGGTTACTAAAAGCTCGAAGCATGTCATGCCGGCGGCATTTGTTTCGTTTAAAACACGATGGGGAGCTGCGGTCTGTGCGCAAACTGAACAATCCAGGAATCCGACTATCTGGTTAACAGAATGGGCTCCAGAACCTCGTGATGTTTACTGGGATAATCTCGCGATTCCGTTCGTTTCACTCACGATTCGGAGGCTCGTAATTGCTGTCGCGTTTTTCTTCCTTACGTTCTTCTTCATGATTCCGATTGCATTCGTACAGTCGCTGGCGAACATCGATGGAATCGTGAAAGCCGCTCCGTTTTTACAGGGCGTTCTCGAAGTTGAATTTGTTAAATCGTTTATCCAAGGTGTTCTTCCTGGAATCGCGTTGAAGATCTTCCTGATTTTTCTACCTTCGATCCTCATGATGATGTCGAAATTTGAAGGATTCACCTCGATTTCAGCTCTCGAGAGAAGATCCGCAACTCGATATTACATTTTCCAATTCATCAACGTCTTCCTCGGCAGCATAATCACCGGAACCGCATTTCAACAGCTAAATACCTTCATCCACCAGTCGGCAAACACAATCCCGATCACAATCGGCGCATCTATACCAATGAAGGCGACCTTCTTCATAACATACATCATGGTAGACGGATGGGCTGGAGTCGCAGGCGAGATTCTCAGGTTAAAACCGCTAATATTCTACCACTTGAAGAATTTCTTCCTAGTGAAAACCGAGAAAGACAGAGAAGAAGCCATGAATCCCGGTAGCTTACCTTTCAACACCGGCGAACCTCAAATCCAGCTTTACTTCTTACTCGGACTTGTCTATGCCGTCGTCACCCCCATTCTCCTTCCTTTTATTGTCGTCTTCTTCGGGTTAGCTTACGTCGTATACCGCCATCAGATTATAAACGTATACAATCAACAATACGAAAGTGCGGGAGCTTTCTGGCCGGACGTTCATGGTCGGATTATAACCGCACTGATTGTTTCACAGCTTCTCTTAATGGGCCTACTGAGTACAAAAGAAGCGGCCCAATCAACCCCCTTACTCATCGTACTCCCTATCCTCACAATTTGGTTTCATAGATTCTGTAAAGGAAGATTCGAACCCGCGTTCGTTAGATACCCTTTACAGGAGGCGATGATGAAAGATACGTTGGAAAGGGCAAGGGAGCCGGGTTTAAATGTGAAAGGATACTTACAAGATGCGTATGTACACCCGGTGTTTAGTAACTGGGATGGGAGTGATGATGGAGTGAGTGATGATGATGATTGGCCGAAAGAGCCGGCTCTTGTCTCCACAAAGCGTGAGTCGCGAGTCAACACGCCGGTCAGGAGTCAGAGGAGTGAGTCGTCAAGGACACTGTTGTGTGTCTTGGATGAAAGATCGTGTCCGTGA 2313 44.14 MASSSEIGLAATINILTAFAFLVAFAILRIQPFNDRVYFPKWYLRGLRNNPLQSGAFVQKFVNLDFRSYLKFLNWMPAALRMPEPELIDHAGLDSVIYLRIYLTGLKIFVPIACLAFTVMVPVNFTNKTLEESKLTYSDIDKLSISNIPTGSNRFFTHLVMAYAFTFWTCYILKREYEKVATMRLHFISSEHRRPDQFTVLVRNVPPDPDESVNELVEHFFLVNHPDNYLSHQVVYNANVLSDLVNEKKTKQNWLDYYQLKYNRSNQSKRPSVKTGYLGLWGKKVDAIEYYESEVEKLSKKICKEREKVTKSSKHVMPAAFVSFKTRWGAAVCAQTEQSRNPTIWLTEWAPEPRDVYWDNLAIPFVSLTIRRLVIAVAFFFLTFFFMIPIAFVQSLANIDGIVKAAPFLQGVLEVEFVKSFIQGVLPGIALKIFLIFLPSILMMMSKFEGFTSISALERRSATRYYIFQFINVFLGSIITGTAFQQLNTFIHQSANTIPITIGASIPMKATFFITYIMVDGWAGVAGEILRLKPLIFYHLKNFFLVKTEKDREEAMNPGSLPFNTGEPQIQLYFLLGLVYAVVTPILLPFIVVFFGLAYVVYRHQIINVYNQQYESAGAFWPDVHGRIITALIVSQLLLMGLLSTKEAAQSTPLLIVLPILTIWFHRFCKGRFEPAFVRYPLQEAMMKDTLERAREPGLNVKGYLQDAYVHPVFSNWDGSDDGVSDDDDWPKEPALVSTKRESRVNTPVRSQRSESSRTLLCVLDERSCP 770
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tako4g04338 770 Pfam Cytosolic domain of 10TM putative phosphate transporter 197 360 IPR027815 -
Tako4g04338 770 Pfam Late exocytosis, associated with Golgi transport 9 176 IPR032880 -
Tako4g04338 770 MobiDBLite consensus disorder prediction 740 756 - -
Tako4g04338 770 Pfam Calcium-dependent channel, 7TM region, putative phosphate 371 643 IPR003864 GO:0016020(InterPro)
Tako4g04338 770 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 8 718 IPR045122 GO:0005227(PANTHER)|GO:0005227(InterPro)|GO:0005886(PANTHER)
Tako4g04338 770 MobiDBLite consensus disorder prediction 722 756 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tako4g04338 K21989 calcium permeable stress-gated cation channel