AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tako4g04351 ATGTCAATGGATGAAGTGATCACCATAGCCGATGCGGCTTACCGCGCAAGCAAGGCTGCGGAAACGGCAGCGACGCCTACATCTTCAGTTCATATGCTCTCCTACAGTGTGCCACTGCTATCAGCCTTCCTCGCCTTCGCTATCGCCCAATTCCTCAAAGTCATCACCACCTGGTATAAGGAACGAAGATGGGATCCTAAAAAGATTGTCGGCTCAGGTGGAATGCCATCATCGCATTCTTCAACCGTAGTAGCACTAGCAGTATCCATAGGTCTACACGAAGGGGTCGAATCATCATCATTCGCCATTGCTGTTGTCTTAGCTTTTATCGTTATGTATGATGCAACTGGAGTCAGACTCCACGCTGGTCGCCAAGCTGAAGTTTTGAACCAGATTGTGTGTGAATTTCCACCAGAACACCCTTTATCCACATCCAGACCTTTACGTGATTCTCTTGGGCATACTCCTGTACAGGTGGTTGCAGGGGCGGTGTTGGGACTCATGGTGGCGTTTGTGATGAAAGCATCCGAGAAGAATCGCTGTTCACGAGGAGGACACGAGGAGGAATCACGCATACAGGAAGAATCGCTGTTTTTGATCATCGTCGCTTTTTTCTTCCATTCCCTCGAAACAAACTCGAAGGTCACGTATACAGGAAGAATCGTTGTTCACGTGGAGGACACGAGGAGGAAGAAAATGGTGATTTGGAATCGTCGTTCTCGCTTTGGCTCTGAACTGAACATACAGGAAGAATATGGAAATTTCGACAAGTTATGTTCTTTCAAAATCCACCACAGTGGGTTGTTTATGAAGAACAGAGGAGTAACATATGAATATGGAGCAGTTGATTATTATGATTTCGTTGATATGGATGTGTTTTCTATTCATGAGTTAGCCGACATGGTTAGGGAACTTGACAACCAACATAGTGAGCCAATATCCTTTCAGTTTCATATACCAGGTACTCAATTGGATGTTGGGTTGCTGCCTCTTCTAACTGATGGTGATGTTCATGATGATATTGAATCAAAATTTGGGTACACAGATTCGGATGATGATGAGACTGAAGATGGGATTGTAGGTGCCAACGACTTACTGTATGATAAGAACAACATCTTGGATGAACCGGACGTTGACATGTCAAACTTTATAAGTGTTCTTGACCACGTAGTTGAGAGAGACCCAAATACCATTCCAATTCCTGATTCATTTGAAAACTTTAATGATGATGATGAATTGAATGTCATTGATACTCAAGTACTAGATTCTATAGTGGTAGAAGGGGACAAGAGGAAGGAAATGTTGAAAATTCTTGCGAAGCCTGTTATTTGTTCACATGGCGAAGTCCATCTACCAGCATTCAGGCTTGGTCAAAAATTCAAGAACAAAGAAGATGTGAAGCAGTTGGTAAAGCTTCATTCCATACACACTAAAAGGGCCCTTTATTTTGATAAAAATTATAAAACACGAATCAGGGTAAAGTGCAATGGTAATGTGGCGTTTGTGATGAAAGCATCCGAGTAA 1524 42.98 MSMDEVITIADAAYRASKAAETAATPTSSVHMLSYSVPLLSAFLAFAIAQFLKVITTWYKERRWDPKKIVGSGGMPSSHSSTVVALAVSIGLHEGVESSSFAIAVVLAFIVMYDATGVRLHAGRQAEVLNQIVCEFPPEHPLSTSRPLRDSLGHTPVQVVAGAVLGLMVAFVMKASEKNRCSRGGHEEESRIQEESLFLIIVAFFFHSLETNSKVTYTGRIVVHVEDTRRKKMVIWNRRSRFGSELNIQEEYGNFDKLCSFKIHHSGLFMKNRGVTYEYGAVDYYDFVDMDVFSIHELADMVRELDNQHSEPISFQFHIPGTQLDVGLLPLLTDGDVHDDIESKFGYTDSDDDETEDGIVGANDLLYDKNNILDEPDVDMSNFISVLDHVVERDPNTIPIPDSFENFNDDDELNVIDTQVLDSIVVEGDKRKEMLKILAKPVICSHGEVHLPAFRLGQKFKNKEDVKQLVKLHSIHTKRALYFDKNYKTRIRVKCNGNVAFVMKASE 507
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tako4g04351 507 Pfam Divergent PAP2 family 38 169 IPR003832 -
Tako4g04351 507 CDD PAP2-like 39 172 - -
Tako4g04351 507 Pfam MuDR family transposase 454 497 IPR004332 -
Tako4g04351 507 PANTHER ACID PHOSPHATASE-VANADIUM-DEPENDENT HALOPEROXIDASE-RELATED PROTEIN 10 175 IPR003832 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tako4g04351 K09775 uncharacterized protein