AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tako4g04372 ATGGAGGAAACCCTAAGCCCTAGCCGTACACCGGGACACAAACAAAGAGCGCCGGTCCTCTCTCCGGATCGACCTTTATTTTTGGGCTCTAACGACGATAAGCTCGAACGTGCTCAAGCACGCGCCGCTCGTGCTGCAGCTATCCGCCGGAAGCCTGTGGCATTGCATCAAGCAACCGATGCTAATCTTGCCGACCCATGTCTTGGCCAAGAGCAGATTATGGAACTGTTTCAAAATTGCATCAAACTAGCCAGTGAGAATAAAATAAACCAGAAGAATACGTGGGAGCTCAATCTGATAGATCACCTCTGCGACATTATTAAGGTTGAAGAAGAGAACGATGTGGAGACGAATTTCCAAAAGGCTAGCTGCACCCTTGAAGCTGGAGTTAGAATATATTCAATGAGGGTGGATTCAGTTCATTCTGAGGCATATAAGGTTCTTGGAGGTATTAGTAGAGTTGCACTGGATGCTGAGCAAGATACTGTAGATGATAACAACACTGACAACATGCCTGGAGAACGCACTTCAAAGAAAGAAAAGGAACTAAAGTTATCTCCTTTATCTACATTGGAATCATCTTTTGAGGCTCTTAATGTGAAGAAATTTGATGTTGCATTTGCTGTGGACCCTTTGTACCATCAAACAACTGCACAATTTGATGAAGGAGGATCAAAGGGTCTTTTACTAAATAACCTTGGAGTCTATGGTGGATGTAGAATGATATTTGATTCACTTGAAGTACCTTCAAAGTGCATGTCATCTTCAAATGAACATAAACTAGATACAATTGACATATCTTTTACCAAAGATTGTATAGAACAAATGTCATCAACCTTTTCAAAGAAACTTGAAATCTCACCAAGTTTGAAGGAAATAGTCAACATGTTTGATGAAGATAACAAAAGACCAGTGGATACGTTTTCTTCTTCCCAAATCTCAATAGAACCAGAATGTGATGAAGCTTTTGAAGGCAGCTTTAATGGAGGTGAAAATGAAAATGAAAATGAAAATGGAAATGATAATTCAGGAACATGGGATTATATAAATGACAACCAAACAAACATAAATGATGATGATGACACTTATGAAGGAGATGAAGCACACTTTGAACCTCTTCATCATCAGGAAAACGAACCGTATGGTAATTATGATGATGATGAAAAATCATCAACAGTTGACAGTTTCTTGTTTTTAAGTCTTGGATTAAATGGAAAACGAAACGCGTGGGCGGGCCCCGAACATTGGAAGTACCGCAAGACTAAAGGTACAGAAGAGGGTGTGAAGGAAAATGGAGCACCAATAATGGCGAAAACCAAAAGAAATAATACCAAAAAACAAGAACCGGATATTGATTTTATAAAAGCATTGGAAATGGATTATGATTTTGAAAGTATATTTGCACCTCCTAAAAACCCTAAAACATTGTTGTTGCCTGCAAATAGAGAGCCATGTAACACAATGCTTCCGGAAGATTGCCATTATCAACCCGAAGATCTTGTCAAACTTTTTCTTCTTCCAAATGTTTTGTGCCTTGGGAAAAGAGGAAGGAGGTATACTGAGGAATCTGGTCAAGAAGGAGAAGGGAATAACAACAATGAAACATTTGATAATTGGGAGAATGATTGTGGTGGATTTGATGATGGAAATGGAAATGTTTTTAGTGATAATGAGGAATCTACCACACTTGTCTCTCAACCCCGCCAGGTAAAGAAGATTGAAGTGGAGTATGATAGAACATCTAAACAAGTTGATGTTCAAGCACTCAAAGAAATCCTTTGGTCATCTATCCAGGAAACACATGGATCAGATCAAGAAAGAGAGTCAGAGGAGGGATTATCATTCAAGAAAATGTTGGGATGTTTTCCAAGTGACGTAAAGAAACCAGCAGCCGCATCAATGGATGCAATCTCCCCACATTTGTGTTTTATATGTTTGCTTCATTTGGCAAATGAACATGGATTGAGCATCCATGGATGTGACAATTTGGATGATCTCACCATACACCTTCCCTCCTAA 2019 39.33 MEETLSPSRTPGHKQRAPVLSPDRPLFLGSNDDKLERAQARAARAAAIRRKPVALHQATDANLADPCLGQEQIMELFQNCIKLASENKINQKNTWELNLIDHLCDIIKVEEENDVETNFQKASCTLEAGVRIYSMRVDSVHSEAYKVLGGISRVALDAEQDTVDDNNTDNMPGERTSKKEKELKLSPLSTLESSFEALNVKKFDVAFAVDPLYHQTTAQFDEGGSKGLLLNNLGVYGGCRMIFDSLEVPSKCMSSSNEHKLDTIDISFTKDCIEQMSSTFSKKLEISPSLKEIVNMFDEDNKRPVDTFSSSQISIEPECDEAFEGSFNGGENENENENGNDNSGTWDYINDNQTNINDDDDTYEGDEAHFEPLHHQENEPYGNYDDDEKSSTVDSFLFLSLGLNGKRNAWAGPEHWKYRKTKGTEEGVKENGAPIMAKTKRNNTKKQEPDIDFIKALEMDYDFESIFAPPKNPKTLLLPANREPCNTMLPEDCHYQPEDLVKLFLLPNVLCLGKRGRRYTEESGQEGEGNNNNETFDNWENDCGGFDDGNGNVFSDNEESTTLVSQPRQVKKIEVEYDRTSKQVDVQALKEILWSSIQETHGSDQERESEEGLSFKKMLGCFPSDVKKPAAASMDAISPHLCFICLLHLANEHGLSIHGCDNLDDLTIHLPS 672
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tako4g04372 672 MobiDBLite consensus disorder prediction 1 26 - -
Tako4g04372 672 MobiDBLite consensus disorder prediction 160 180 - -
Tako4g04372 672 MobiDBLite consensus disorder prediction 329 356 - -
Tako4g04372 672 MobiDBLite consensus disorder prediction 323 366 - -
Tako4g04372 672 Pfam Condensin complex subunit 2 24 525 IPR022816 GO:0000796(InterPro)|GO:0007076(InterPro)
Tako4g04372 672 Pfam Condensin complex subunit 2 548 668 IPR022816 GO:0000796(InterPro)|GO:0007076(InterPro)
Tako4g04372 672 PANTHER CONDENSIN COMPLEX SUBUNIT 2 14 670 IPR022816 GO:0000796(InterPro)|GO:0000799(PANTHER)|GO:0003682(PANTHER)|GO:0007076(PANTHER)|GO:0007076(InterPro)
Tako4g04372 672 PIRSF Condensin-H 5 562 IPR022816 GO:0000796(InterPro)|GO:0007076(InterPro)
Tako4g04372 672 PIRSF Condensin-H 544 672 IPR022816 GO:0000796(InterPro)|GO:0007076(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tako4g04372 K06676 condensin complex subunit 2