Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tako4g04376 | ATGGTGAATTTTCCTGAATCGTTGTATGACGACCATAAAGGTGCTTCTAGCTCTAATTCCGCTCCACAGACCACCGCCAGACCACAATTCTTCACGGCGGCGGATCGTGCTGAAATTCAGCAGTGGATCAACTTGCTTAACCAACCTCAGACCAGAGCTGAGGCTATTACGCAGATCAGCAACCTCTACAGGACGCACAAGGAAAAAGGAGGTCGTGAGCTGGGGTTGCTTCTTTGGAATTCAAAAGGCACAGCTTTTTCATTGTTGGAGGAACTTTTGAGTGTATACAAGGTGTTATCACCTTCTAGACTTCGTATGGTACAAGCAACAAAGGTTTGCAATGCACTTGCCTTGATTCAGTGCATGGCAACTCATCCAGAAGCAAGACTCGAGCTTCTCAAAGCCCATATACCTGTATACATTTACCCTCTTCTCAACACCACTGAGAAACAACTTCCGCAGTATGATTACGTGCGACTCAACAGCTTAATGGTCATTGGGGCCCTTCTCAAGGTTGAAGACCTGAAAACTACTGAAATCGTTCGTTATCTTTTACAAAGTGAAACGGTTCCCTTATGCCTCCGTTGCATGGATGTGGGTAACGAGCTCACAAAATCGATGGCAGCATATGTGCTTGGGAAGATTTTAGGGCAAGAAGAAGGAAAGTTTTACTGTGGGTCATTTACGGAAAGATTTTTTTCGCTATCAAGAGCACTGTCAAAAATGGTCCATGAGTTTGCTGGAAAGCCGCGACCCGCGTTGTTGAAGAATACGCTGATTTGTTACCTGCGCCTCTCGGAAATCTCCAGGTCAGTCGGGTGCGTTGATGCATTGAAGAAACGCTACCCTAAGAGATTGATGGACCCCACGTACCTCCACCATGTTTGTGTAAGTATTTTCTCTTTAATGGTTAAAATATATATAGTTATATCAAACACTTTGAATATTGGACCATACAAGTCTAGCATCTTAATTGAACAATTAAGAAGGTCATCGAATAGTCTTTACCCGTTTGCATTCTAA | 1023 | 43.7 | MVNFPESLYDDHKGASSSNSAPQTTARPQFFTAADRAEIQQWINLLNQPQTRAEAITQISNLYRTHKEKGGRELGLLLWNSKGTAFSLLEELLSVYKVLSPSRLRMVQATKVCNALALIQCMATHPEARLELLKAHIPVYIYPLLNTTEKQLPQYDYVRLNSLMVIGALLKVEDLKTTEIVRYLLQSETVPLCLRCMDVGNELTKSMAAYVLGKILGQEEGKFYCGSFTERFFSLSRALSKMVHEFAGKPRPALLKNTLICYLRLSEISRSVGCVDALKKRYPKRLMDPTYLHHVCVSIFSLMVKIYIVISNTLNIGPYKSSILIEQLRRSSNSLYPFAF | 340 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tako4g04376 | 340 | Gene3D | - | 31 | 306 | IPR011989 | - | |
| Tako4g04376 | 340 | Pfam | Cell differentiation family, Rcd1-like | 42 | 291 | IPR007216 | GO:0006402(InterPro)|GO:0030014(InterPro) | |
| Tako4g04376 | 340 | PANTHER | UNCHARACTERIZED | 17 | 293 | IPR007216 | GO:0000932(PANTHER)|GO:0006402(InterPro)|GO:0017148(PANTHER)|GO:0030014(InterPro)|GO:0030015(PANTHER) | |
| Tako4g04376 | 340 | SUPERFAMILY | ARM repeat | 112 | 224 | IPR016024 | - | |
| Tako4g04376 | 340 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tako4g04376 | K12606 | CCR4-NOT transcription complex subunit 9 |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 163831 | Tako2g00263 | Tako4g04376 |
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| Tako | Rcd1 | 1.9e-68 | No_clan | TR | Rcd1-like |