Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tako4g04382 | ATGGGTACCATATTCAAAGCAAGCTTGCTCTTATCATTCCTGTTGTGTCTTCTCTCACCTTCTGCATATTCAGCTTCTAATGGTGGATTGGTTAGAGTTAGTCTTAAAAAGAGGAAAATCAACCAATTAAACAAACATGGTGGACATTCTTCCTTAAATGAAGAAAATCCTGGAAGAAATTCTGGTCTTTATGGTAACTTTAGGGATTCAGAAAGTGACATAATTTCTCTGAAAAACTACATGGATGCTCAGTATTATGGTGAGATTGGTATTGGCACTCCACCTCAAAAGTTCACTGTCATTTTTGATACTGGAAGCTCTAACCTTTGGGTGCCTTCTACCAAGTGCTATTTCTCAGTTGCTTGCCTTTTCCACTCAAAATATAAGTCTAGCCAATCAAGTACATACAAAAAGAATGGGAAATCTGCTGCAATTCGATATGGAACTGGCGCTATCTCTGGTTTCTTTAGCCAAGATTCTATAAAACTTGGTGATTTTGTCATCAAGGAACAGGATTTCATAGAGGCAACCAAAGAGCCAGGTGTCACTTTTGTGGCGGCAAAGTTTGATGGTATACTTGGCCTTGGGTTTCAAGAAATCTCTGTGGTGATGCTCTTCCTGATTAGGTACAACATGGTTGACCAAGGTCTAGTTCATGAACCGGTTTTTTCATTTTGGCTTAATCGCAATACATCGAATGAGGAAGGGGGTGAACTTGTATTTGGTGGGGTTGATACAAATCATTTCAAAGGCAAACATACTTATGTCCCTGTTACTCAAAAGGGTTACTGGCAGTGGAATTTCTGA | 807 | 39.28 | MGTIFKASLLLSFLLCLLSPSAYSASNGGLVRVSLKKRKINQLNKHGGHSSLNEENPGRNSGLYGNFRDSESDIISLKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTKCYFSVACLFHSKYKSSQSSTYKKNGKSAAIRYGTGAISGFFSQDSIKLGDFVIKEQDFIEATKEPGVTFVAAKFDGILGLGFQEISVVMLFLIRYNMVDQGLVHEPVFSFWLNRNTSNEEGGELVFGGVDTNHFKGKHTYVPVTQKGYWQWNF | 268 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tako4g04382 | 268 | ProSitePatterns | Eukaryotic and viral aspartyl proteases active site. | 100 | 111 | IPR001969 | GO:0004190(InterPro)|GO:0006508(InterPro) | |
| Tako4g04382 | 268 | SUPERFAMILY | Acid proteases | 10 | 267 | IPR021109 | - | |
| Tako4g04382 | 268 | ProSiteProfiles | Peptidase family A1 domain profile. | 85 | 268 | IPR033121 | - | |
| Tako4g04382 | 268 | Gene3D | Acid Proteases | 31 | 243 | IPR021109 | - | |
| Tako4g04382 | 268 | PRINTS | Pepsin (A1) aspartic protease family signature | 91 | 111 | IPR001461 | GO:0004190(InterPro)|GO:0006508(InterPro) | |
| Tako4g04382 | 268 | PRINTS | Pepsin (A1) aspartic protease family signature | 237 | 250 | IPR001461 | GO:0004190(InterPro)|GO:0006508(InterPro) | |
| Tako4g04382 | 268 | FunFam | Aspartic proteinase A1 | 31 | 243 | - | - | |
| Tako4g04382 | 268 | PANTHER | BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED | 12 | 267 | IPR001461 | GO:0004190(InterPro)|GO:0004190(PANTHER)|GO:0006508(PANTHER)|GO:0006508(InterPro) | |
| Tako4g04382 | 268 | Pfam | Eukaryotic aspartyl protease | 84 | 267 | IPR033121 | - | |
| Tako4g04382 | 268 | Gene3D | Acid Proteases | 244 | 267 | IPR021109 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tako4g04382 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 163833 | Tako2g00270 | Tako4g04382 |