AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tako4g04421 ATGACTCAGATTAGCAAAAAAATGTATGCATTAGACCTCAAGAGAACGATTCTATGGCGTGTAGCTCTTCTCCGGCGATGTGCTAAATCTCTCTGGCACCAAATTCTTGCTTGTTGGATCGGAAAATCTGTCCGGTACCGGCAATTATTACACCCCGGCCCTTTGATTCCGACGTCTCATCGGCGGCCTTCTCCCGTGGAGACAACAACGACGACGATCGACATGGCCACCGCGAACCACCAGTCTCCATCCGGCGAAATGTCGTCGTCCTCCGGCAGCTCCGATCATGATCAAGATACTTCTGATTTGGTGGCGTTGAAGATTAGCCTGTTGGGTGATCATCATATCGGAAAAACAAGCTTCTTGGCAAAGTACGTTGGGAAAGAAAAGAATCAAGAACAATTACAAGATAAAGGCACTAATCACATGGATAAAACACTATGTGTTAAAGGAGCCAGGATCAACTACACTATTTGGGAAGTCGGTTGTGATGCATTTTGTCCAGTTTGTGTAGATGGCGATTTGAGGACGTCGATTCCTGCTGCTTGTAAAGACTCAGTAGCAATGTTGTTCATGTTTGATCTAACAAGTCGTTGTACACTTAATAGTGTTATCAATTGGCATCAGCAAGCTAGGACTTATAATCAGAACGCGATTCATGTGATGGTTGGTAGCAAGTTTGACGAATTTGTGCAACTTCCGTTGGATTTACAATGGACAATCGCAAGTCAGGCAAGAGCATATGCAAAGGCTATAAATGCGACACTCTTCTTCTCAAGTGCATCTTACAATATAAATGTTAATAAAATCTTTAAGTTCGTAACCGCAAAGCTCTTTGATTTGCCATGGACTTTGGAGCGAAATCTTACAATTGGCGAGCCTATTATTGATTTCTGA 897 43.14 MTQISKKMYALDLKRTILWRVALLRRCAKSLWHQILACWIGKSVRYRQLLHPGPLIPTSHRRPSPVETTTTTIDMATANHQSPSGEMSSSSGSSDHDQDTSDLVALKISLLGDHHIGKTSFLAKYVGKEKNQEQLQDKGTNHMDKTLCVKGARINYTIWEVGCDAFCPVCVDGDLRTSIPAACKDSVAMLFMFDLTSRCTLNSVINWHQQARTYNQNAIHVMVGSKFDEFVQLPLDLQWTIASQARAYAKAINATLFFSSASYNINVNKIFKFVTAKLFDLPWTLERNLTIGEPIIDF 298
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tako4g04421 298 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 106 290 IPR027417 -
Tako4g04421 298 SMART rab-sub-5 106 281 - -
Tako4g04421 298 FunFam Septum-promoting GTP-binding protein 1 96 288 - -
Tako4g04421 298 Pfam Ras family 107 277 IPR001806 GO:0003924(InterPro)|GO:0005525(InterPro)
Tako4g04421 298 PANTHER - 104 297 - GO:0003924(PANTHER)|GO:0005525(PANTHER)
Tako4g04421 298 Gene3D - 94 287 IPR027417 -
Tako4g04421 298 MobiDBLite consensus disorder prediction 78 99 - -
Tako4g04421 298 ProSiteProfiles small GTPase Rab1 family profile. 97 298 - -
Tako4g04421 298 PRINTS Transforming protein P21 ras signature 106 127 - -
Tako4g04421 298 PRINTS Transforming protein P21 ras signature 256 278 - -
Tako4g04421 298 PRINTS Transforming protein P21 ras signature 216 229 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tako4g04421 K07976 Rab family, other