Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tako4g04421 | ATGACTCAGATTAGCAAAAAAATGTATGCATTAGACCTCAAGAGAACGATTCTATGGCGTGTAGCTCTTCTCCGGCGATGTGCTAAATCTCTCTGGCACCAAATTCTTGCTTGTTGGATCGGAAAATCTGTCCGGTACCGGCAATTATTACACCCCGGCCCTTTGATTCCGACGTCTCATCGGCGGCCTTCTCCCGTGGAGACAACAACGACGACGATCGACATGGCCACCGCGAACCACCAGTCTCCATCCGGCGAAATGTCGTCGTCCTCCGGCAGCTCCGATCATGATCAAGATACTTCTGATTTGGTGGCGTTGAAGATTAGCCTGTTGGGTGATCATCATATCGGAAAAACAAGCTTCTTGGCAAAGTACGTTGGGAAAGAAAAGAATCAAGAACAATTACAAGATAAAGGCACTAATCACATGGATAAAACACTATGTGTTAAAGGAGCCAGGATCAACTACACTATTTGGGAAGTCGGTTGTGATGCATTTTGTCCAGTTTGTGTAGATGGCGATTTGAGGACGTCGATTCCTGCTGCTTGTAAAGACTCAGTAGCAATGTTGTTCATGTTTGATCTAACAAGTCGTTGTACACTTAATAGTGTTATCAATTGGCATCAGCAAGCTAGGACTTATAATCAGAACGCGATTCATGTGATGGTTGGTAGCAAGTTTGACGAATTTGTGCAACTTCCGTTGGATTTACAATGGACAATCGCAAGTCAGGCAAGAGCATATGCAAAGGCTATAAATGCGACACTCTTCTTCTCAAGTGCATCTTACAATATAAATGTTAATAAAATCTTTAAGTTCGTAACCGCAAAGCTCTTTGATTTGCCATGGACTTTGGAGCGAAATCTTACAATTGGCGAGCCTATTATTGATTTCTGA | 897 | 43.14 | MTQISKKMYALDLKRTILWRVALLRRCAKSLWHQILACWIGKSVRYRQLLHPGPLIPTSHRRPSPVETTTTTIDMATANHQSPSGEMSSSSGSSDHDQDTSDLVALKISLLGDHHIGKTSFLAKYVGKEKNQEQLQDKGTNHMDKTLCVKGARINYTIWEVGCDAFCPVCVDGDLRTSIPAACKDSVAMLFMFDLTSRCTLNSVINWHQQARTYNQNAIHVMVGSKFDEFVQLPLDLQWTIASQARAYAKAINATLFFSSASYNINVNKIFKFVTAKLFDLPWTLERNLTIGEPIIDF | 298 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tako4g04421 | 298 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 106 | 290 | IPR027417 | - | |
| Tako4g04421 | 298 | SMART | rab-sub-5 | 106 | 281 | - | - | |
| Tako4g04421 | 298 | FunFam | Septum-promoting GTP-binding protein 1 | 96 | 288 | - | - | |
| Tako4g04421 | 298 | Pfam | Ras family | 107 | 277 | IPR001806 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
| Tako4g04421 | 298 | PANTHER | - | 104 | 297 | - | GO:0003924(PANTHER)|GO:0005525(PANTHER) | |
| Tako4g04421 | 298 | Gene3D | - | 94 | 287 | IPR027417 | - | |
| Tako4g04421 | 298 | MobiDBLite | consensus disorder prediction | 78 | 99 | - | - | |
| Tako4g04421 | 298 | ProSiteProfiles | small GTPase Rab1 family profile. | 97 | 298 | - | - | |
| Tako4g04421 | 298 | PRINTS | Transforming protein P21 ras signature | 106 | 127 | - | - | |
| Tako4g04421 | 298 | PRINTS | Transforming protein P21 ras signature | 256 | 278 | - | - | |
| Tako4g04421 | 298 | PRINTS | Transforming protein P21 ras signature | 216 | 229 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tako4g04421 | K07976 | Rab family, other |