AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tako4g04443 ATGGGATCTGCATGTTGTGTGGCTGCTAGAGATAGAACCATAACAGATCGATCTGGAAGTAGTGATGTTGTTGTTAGAAATGATAGGTATTCGCCTTCATGGAGCTTTAGATGGGATAACAGAGGGCGTGTAGCAGGTGAAGAATCCTCCATGAATGGTTTCTCTCATGGAGTTGTTACAAATGATAGATTATTGGACAATAAATCTCATGCCACAGAAGAAGGCAGTCCATTGGACAGTTCAAGAAGTCTCACATGGCAAAAGTCTTCACCTTCTGAAGAAATTAGATTTCATCAATCAGATCCATTGAATTCCAAGAATCTTCCTGCTGGAAAGGAGTCGATGGAAACTCCAGTAACTTTAGACCTCTCTCCAACAAAAACATCAACATCATCCTTGTCAGCATCTCCTCTCTCTTCCTCCCAAGGCCACCTCCCTCCTCTCTCAACCCTAACCCCATCCCGGTGGCCCCGCCACCACCACCACCACAACCACCTCCGGCAAGTCTCCGACTCCCGCATCCGCGGCATTATGTCCCCAAACTTTTCAATATCCGAAGAAGCCTCCCCTTCCCCTTCATCCTTCATCCACCCAGGGTGGGCCCCCCACCACCACCACAACAAGTCCACCCGCGGCGGATCCTCCGACCTCTCCTCCGACCCCACCACCTACTCCGACCTCATGGCCATCTACAACCACAACAACAATAGCAACAATAGCAACAATAGTAAAAGATGGTCTTTTGATAGCGAGTCTTTAAGTTTTAGTCGCGAGAGGGGATACAGTCGGTCTAGTGGGCCCAGGGTTTTCTCCTCCTCCTCCTCCCCTTCTGTAGTTGATGTTGTTGTCCAACCCGTATGCGGTGTCTGCTCCAAGCTTTTAACCGAACGGTCATATTGGGGGGCACAGAAGCTAGCGGCGGGGATGGCGGCGGGCGTGGCGGCTAACGGGCTTCCGGTGGTGGCGGTTTTGATATGCGGGCATGTTTATCATGCAGAGTGTTTGGAAAACATGACGCCCGATGTTGACAAATACGACCCTGTATGTCCCGTTTGTACTTTTGGGGAGAAGAAGGTGGTTAAGTTGTTGGAAAAGGCACGCGGGGAGATGGATTTGAAGGGTAAAATCGGAAAGTTGAGAAGGCGGGTGATTGATGGTGGTGGTTCGGTTTTTTTTGAGAAAAGTAGTATGAAGAGTAGTGGAAAGCCGTTTTTGACAAGGCATTTTTCTTTTGGGTATAATAAACCAAATAGATCTTTTTCCGATAATGGATCCAAGAAAAAAAAGTTTTTTTGGTCAAAATCAAGCAAGGAGTGA 1317 48.06 MGSACCVAARDRTITDRSGSSDVVVRNDRYSPSWSFRWDNRGRVAGEESSMNGFSHGVVTNDRLLDNKSHATEEGSPLDSSRSLTWQKSSPSEEIRFHQSDPLNSKNLPAGKESMETPVTLDLSPTKTSTSSLSASPLSSSQGHLPPLSTLTPSRWPRHHHHHNHLRQVSDSRIRGIMSPNFSISEEASPSPSSFIHPGWAPHHHHNKSTRGGSSDLSSDPTTYSDLMAIYNHNNNSNNSNNSKRWSFDSESLSFSRERGYSRSSGPRVFSSSSSPSVVDVVVQPVCGVCSKLLTERSYWGAQKLAAGMAAGVAANGLPVVAVLICGHVYHAECLENMTPDVDKYDPVCPVCTFGEKKVVKLLEKARGEMDLKGKIGKLRRRVIDGGGSVFFEKSSMKSSGKPFLTRHFSFGYNKPNRSFSDNGSKKKKFFWSKSSKE 438
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tako4g04443 438 Gene3D Zinc-RING finger domain, C3HC4 (zinc finger) 272 354 IPR013083 -
Tako4g04443 438 SUPERFAMILY RING-U-box 286 353 - -
Tako4g04443 438 PANTHER EXPRESSED PROTEIN 1 358 - -
Tako4g04443 438 ProSiteProfiles Zinc finger RING-type profile. 287 353 IPR001841 -
Tako4g04443 438 MobiDBLite consensus disorder prediction 119 149 - -
Tako4g04443 438 MobiDBLite consensus disorder prediction 69 220 - -
Tako4g04443 438 MobiDBLite consensus disorder prediction 174 192 - -
Tako4g04443 438 MobiDBLite consensus disorder prediction 76 111 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tako4g04443 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
163507 Tako1g04687 Tako4g04443