Gene detail

AGRP Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tako4g04468	ATGGCAAATAGATCAGTTGCTGCCTATGCAGTCCTTCTTCTCATCTTCGTTCTTGCCATCTCAGAACTAGCGACAGTGAAAGGAAAATTATGTGAAAAAGCTAGTCAAACGTGGTCTGGAAAGTGTATTGGAAAGAAGTGTGACAAAAAGTGCAAAGGTTGGGAGAAGGCACTTCACGGAGCTTGTCACAAGCGTGAAGCTAAAGCGAATTGCTATTGCTACTTCGACTGTGCCAAGAAACCACCAAAAGGTGCAAAACCGGCTCCTCCTGATGCCGCAACCACCCCTCCTCCCCCTCCTCCCGATACCCCTGCTGATGGTGGATCTCCGCCACCTAAATTCATGCACTAA	351	48.15	MANRSVAAYAVLLLIFVLAISELATVKGKLCEKASQTWSGKCIGKKCDKKCKGWEKALHGACHKREAKANCYCYFDCAKKPPKGAKPAPPDAATTPPPPPPDTPADGGSPPPKFMH	116

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tako4g04468	116	PANTHER	DEFENSIN-LIKE PROTEIN 1	8	77	-	GO:0006952(PANTHER)
	Tako4g04468	116	Gene3D	-	27	77	IPR036574	-
	Tako4g04468	116	MobiDBLite	consensus disorder prediction	82	116	-	-
	Tako4g04468	116	Pfam	Gamma-thionin family	29	77	-	-
	Tako4g04468	116	SMART	gth-4	30	77	IPR003614	GO:0006952(InterPro)
	Tako4g04468	116	MobiDBLite	consensus disorder prediction	83	116	-	-
	Tako4g04468	116	SUPERFAMILY	Scorpion toxin-like	29	77	IPR036574	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tako4g04468	-	-

Gene Family Members

Select	Gene	Event_type	S_start	S_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tako4g04460	.	7	78	Plant Defensins gene family	AT1G19610	44.444	1.81e-15	67.0
	Tako4g04462	.	4	78	Plant Defensins gene family	AT1G19610	42.105	8.39e-13	57.8
	Tako4g04463	.	1	78	Plant Defensins gene family	AT1G19610	37.975	8.41e-12	55.5
	Tako4g04464	.	1	78	Plant Defensins gene family	AT1G19610	37.975	8.41e-12	55.5
	Tako4g04465	.	4	78	Plant Defensins gene family	AT1G19610	44.737	1.35e-14	62.4
	Tako4g04467	.	5	78	Plant Defensins gene family	AT1G19610	41.892	4.14e-18	71.6
	Tako4g04468	.	1	78	Plant Defensins gene family	AT1G19610	42.308	1.27e-19	74.7
	Tako4g04470	.	1	77	Plant Defensins gene family	AT1G19610	38.961	9.34e-20	75.1
	Tako4g04471	.	6	78	Plant Defensins gene family	AT1G19610	45.205	1.83e-18	72.8
	Tako4g04474	.	1	78	Plant Defensins gene family	AT1G19610	47.436	6.27e-23	83.2
	Tako5g04152	.	1	77	Plant Defensins gene family	AT2G02100	62.338	1.94e-30	101.0