AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tako4g04515 ATGGATCGCCACTATCTTCAAAAGCCACACAGCGAAAATCGGAAAGATGAAGAAGAAGGTGAAGCGGAGGCTGTGATAATTGGGGGTATGGTGTTAGATATACATGCCACTCCTTCTACTCCTCCAAACCCTAGAACCACCACTCCCGGCAAGGTGCGCTATGCAGCAGGAGGTGTAGCGAGGAACATAGCCGAGTGTGTATCAAAGCTTGGAACAAATCCTTTCATGATAAGCGCACTAGGTTTGGACATGGCAGGGAATTTGCTGTTGGAGTACTGGAAATCAACAGGATTATCAACAAAAGCTATCCGAATGGGAAATGAGATAGAGACTCCAGTTGTATCCATTGTATTTGATACCGAAGGAGAACCAGCTGCTGCTGTTGCAAGTGTTGAATCTCTTGAACGGTTTCTTACACCTAACTGGATCCAACAATTTAAATCCAATTTAGCTTCTGCTCCTATAGTCATTGTTGATGCAAACTTAAGTCCACTAGCTCTTAAAGCATCTTGCCAATTGGCAACAGAGGTTGGTACCCCAGTGTGGTTTGAGCCTGTATCTGTAGCAAAGTCTAGAAGAATTGTTTCAATTGCCAAGTATATAACATTTGCTTCACCTAATGAAGACGAATTGATTGCCATGGCGAATGCTCTATCTCCAAAACACACATTCTCTCCAATTCCCAAACAAACACTCACAATAACATCTTTATTAAAACAACTAAAACCAGCAATCTCGATTTTACTTGAAAAAGGCATCAAAGTAGTCATTCTAACACTTGGATCAAAAGGAGTTTTATTATGTTACAAAAAGGACTTCACCTTTCACTATCCTATTTCCCCAAAAGGTAACAAAAGGTTGCGAGAAAAAATAAATGTAGTGTGTCCACCGGACCGGTTTTCCGGCGGTGGTGTGGTCCATTTTCCGGCGGTGTCGCGGGCGGCGGTTGCGAGGCTGACCGGAGCTGGCGACTGTCTGGTGGGTGGTGTGGTGGCGGCTGTTTGTTCGGGTTTGGATTTAATGCAAAGTATTGCGGTTGGAATTGCAACTGCTAAAGCTGCTGTTGAAGTTGAGACGAATGTGCCTTTTGAATTTAATTTGGAGAAAATTACGGAGGATGCAAGATCGGTGTACTTGGGTGCCAAGGTTGTTTTTTGTCCGTCTATGTTGTAA 1173 43.56 MDRHYLQKPHSENRKDEEEGEAEAVIIGGMVLDIHATPSTPPNPRTTTPGKVRYAAGGVARNIAECVSKLGTNPFMISALGLDMAGNLLLEYWKSTGLSTKAIRMGNEIETPVVSIVFDTEGEPAAAVASVESLERFLTPNWIQQFKSNLASAPIVIVDANLSPLALKASCQLATEVGTPVWFEPVSVAKSRRIVSIAKYITFASPNEDELIAMANALSPKHTFSPIPKQTLTITSLLKQLKPAISILLEKGIKVVILTLGSKGVLLCYKKDFTFHYPISPKGNKRLREKINVVCPPDRFSGGGVVHFPAVSRAAVARLTGAGDCLVGGVVAAVCSGLDLMQSIAVGIATAKAAVEVETNVPFEFNLEKITEDARSVYLGAKVVFCPSML 390
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tako4g04515 390 MobiDBLite consensus disorder prediction 1 21 - -
Tako4g04515 390 Pfam pfkB family carbohydrate kinase 24 282 IPR011611 -
Tako4g04515 390 CDD YeiC-kinase-like 25 356 - -
Tako4g04515 390 SUPERFAMILY Ribokinase-like 24 357 IPR029056 -
Tako4g04515 390 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 57 81 IPR002173 GO:0016301(InterPro)
Tako4g04515 390 Gene3D - 19 378 IPR029056 -
Tako4g04515 390 PRINTS Ribokinase signature 196 211 IPR002139 GO:0016301(InterPro)
Tako4g04515 390 PRINTS Ribokinase signature 26 47 IPR002139 GO:0016301(InterPro)
Tako4g04515 390 PRINTS Ribokinase signature 256 267 IPR002139 GO:0016301(InterPro)
Tako4g04515 390 PANTHER ZGC:136858 11 371 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tako4g04515 - -