Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tako4g04520 | ATGTTCTTCAGCTTCACACCTTTTAAAGGCATGAAATCAAAAATCGTTCCTTACTACATGAACGGAAATCCATCCAGTCTCTTCTGCATCTTGCCAAGAGACGATTCTTCCCGCTTTTTCCCTCCGGGCACCGCCCCTGTTTACCTTAACGTCTACGACATCTCCACCATCAACAGTTGCATATCATGGACAGGCATCGGCGCCTTTCACACAGGTTTAGAAGTTCACGGCGTGGAATATGGTTTCGGATGTCATCAAGAATCAGAGAGCGGTGTTTTTGAGATCGAACCTCGAAAATGCCCTGGGTTTAAATTCAGGGAATCGATTTTAATGGGGACAACGAAATTGAGCCCTAGCCAAGTTCAAAGATTCATTGAGCTGCAATCCAATAACTACTATGGCGACACGTACCACTTATTTGGGAAGAATTGCAATCATTTTTGCGACGACATGTGTCACAAATTAACCGGAAATAAAATCCCTAGATGGGTTAATCGACTTGCTAGAATAGGTTCATGTTGCCGATGTATACTTCCGAAATCAATCAAGGGTTCGGCAGTTAAAAACAAATCAAATTCCGATGAAGATGAACACAAGAGTTTACGAGGCTCTTTTAGTTGTTTTTCGTTGTTTTCAACACATAATAAATTGAGAAAAGTTTCAATATCGTCGTTATATAAGCATTCGCTCTATAAAGGATGCCTTCCGCCATGGGAGTTGCAGGTGGACTCGCGAAGGCTTTGTGAAGAAGATGAAGATGATGAGTGA | 768 | 42.06 | MFFSFTPFKGMKSKIVPYYMNGNPSSLFCILPRDDSSRFFPPGTAPVYLNVYDISTINSCISWTGIGAFHTGLEVHGVEYGFGCHQESESGVFEIEPRKCPGFKFRESILMGTTKLSPSQVQRFIELQSNNYYGDTYHLFGKNCNHFCDDMCHKLTGNKIPRWVNRLARIGSCCRCILPKSIKGSAVKNKSNSDEDEHKSLRGSFSCFSLFSTHNKLRKVSISSLYKHSLYKGCLPPWELQVDSRRLCEEDEDDE | 255 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tako4g04520 | 255 | PANTHER | DESUMOYLATING ISOPEPTIDASE | 44 | 197 | IPR008580 | GO:0008233(InterPro)|GO:0016579(PANTHER)|GO:0070646(PANTHER)|GO:0101005(PANTHER) | |
| Tako4g04520 | 255 | SMART | DUF862-2a | 45 | 183 | IPR008580 | GO:0008233(InterPro) | |
| Tako4g04520 | 255 | Pfam | PPPDE putative peptidase domain | 46 | 180 | IPR008580 | GO:0008233(InterPro) | |
| Tako4g04520 | 255 | ProSiteProfiles | PPPDE domain profile. | 45 | 182 | IPR008580 | GO:0008233(InterPro) | |
| Tako4g04520 | 255 | Gene3D | PPPDE domains | 41 | 199 | IPR042266 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tako4g04520 | K22763 | deubiquitinase DESI2 [EC:3.4.19.12] |