AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tako4g04553 ATGGAAACGTTAGAGGATCTGATCGAAGAAGCAAAGCTTCGTACTGTATGGTGGGGTATCTGCATTTTCGCTGTCACATACCTTTTAACACACACGAGCAAATTAATGTGGATGAATGTTCCTATAGCAATTCTTCTGGTATCAGGCGTTCATATTTTATTAACCCAAGTAGATCTCCGTTGGAAGATCAGGAAATCAAACCAACATTCATATCTAGCACACTTACAGAAAAAACAATTGTCTGTAAATGACTCTCGTCTTACCACCTTGCCTCCTCCACCTAAATGGAAGAGGAAGATCGATTCTCCAGTAGTTGAGGCTGCCATGGATGATTTCACTAACAAGATTTTGCAAGAGTTCGTGGTTGATCTGTGGTATTCAAGTATAACACCTGACAAGGAAGCTCCACAGCTTATACATTCAATCATTATGGATATTTTTGCAGAAGTTTCCATGAGAGTCAAAGACATAAACCTTGTTGACATGTTAACAAGGGATGTAGTTGACCTAGTAGGGGACCACATAGAGCTATTTAGGAAGAACCAAGCTTCTATTGGGAGAGAAGTTATGGTGACACTATCATCTGAAGAAAGAGATGAAAGGTTAAAACACCATCTGATGGCTTCAAAGGAGCTTCATCCGGCTTTGATATCTCCCGAGAGTGAGTACAAGTATCTTAAGCGGATTATGGGAGCACTTTTGACAGCTGTTCTTAGACCACGAGAAGCTCAATGTCCTATTGTTAGATGCATTATGCGAGAGCTTTTAACATGCTTGGTTATGGAACCTGCAATGAGATTCGCAAGCCCCGGTCATATTAACGAGTTGATTGAGGGTATTTTTCTTGCCACCAACAAGGGAGAGAAAGACACAGTTGATGATCAATCTAACCCAACAGTAGAAACCCAAAATCAATCTTCTGAAAAAAGTCAACCAGAGTCAAACAACGGGTCCTCCAGTAACCAAAAGAGTGAGAAACCATCACCTCCTACCCCCAACAACCAAAAAGAATCAACCACAACTCCCACAATGGCAAGTGGGCCCACCACCCAAGATGACTCAACACCCACACGGACATCTGACTGGGCCCGTGTTCTTGAAGCAGCAACCCAAAGAAGAACAGAAGTCTTACAACCTGAAAACCTTGAAAACATGTGGACAAGAGGAAGGAATTACATGAAGAAATCTCAAAAGAATCCTAATGTTGTTGATAGTGGAAGTGACCAGAATTTTGATGAAAGTTTTAGTTTTGATGGTGGAAGTGATGGGAAGTTGAAATGGTCAAATAGTGGATCTGAGTCAAACATTCAAAGTATGACTGAAATTGCATCGCCAATCAATGTTGGTGGGACCATTATACAGGAGTTTTATAGCGTGAATGCTGGAAGAGAGAATGATGTACAAAATGTTAATATTTCTTCTGAAAATAATAATAATAATAATAAAGTAATACGGACTGAAGGGCATGTTCCAAAGCTTAGGTGTCGGGTTTTAGGAGCATTTTTTGAGAACATTGACTCAAAATCGTTTGCAGTGTATTCAATTGCAGTAACAGATGCTGATAACAAGACTTGGTTTGTAAAAAGAAGATATAGAAACTTTGAAAGACTTCACCGACATCTGAAGGACATTCCCAATTACACATTACATTTGCCACCTAAAAGAATATTCTCATCTAGCACTGAAGATGCATTTGTTCGCCAACGATGTATACAACTTGATAAATATCTCAAAGATCTTTTGTCTATAGCTAATATAGCAGAACAACATGAAGTATGGGACTTCTTGAGCATGTCTTCCAAGAGTTACTCTTTTGGAAGGTCAACATCGGTAGTCAAAACCTTAGCAGTCAATGTGGATGATGCTGTGGACGATATGGTCCGGCAATTCAAAGGTGGAAAAATGCCAAAAGGCGTGGGCCCCGGTTCCCCTTCTGAATCTCCTTATTCATCAGCTCCAAACAGAAACTACTCACCATTAAAGCAGCCGACTTTTGATATGTCAAACATTGTTTCTGACTATGAAGAAGATGGTGGTAATAATAAGACAGCCAAGTATGAGGAAATGGAGTCAATGGGACAAGTTTACGGGGGGTATTTTGACAACGATGTGAATGTTAAAGGGGGAGTTTCACTTTCACCCAAAGTCGTTAATAAAAATGATGAACAAAATAATAATAAAAATATGGGTTTGGAGAAGAGGAATAGTTCAGAGGTACGATCTGAAATACTTACCATGGCTGCAAATTTTCCCACAACTCCTGGCTCAAAGGATGATCCACTTGGTATGCCCGCAGAGTGGAGCCCACCTAATGTAAGTGTTCCTTTGCTAAATTTGGTAGACAAGATATTTCAACTCAACAGAAGAGGGTGGTTGAGACGACAGGTGTTTTGGATGTCGAAGCAAATACTGCAACTAATGATGGAAGATGCAATCGATGACTGGCTGTTGAGGCAAATCCATTGGCTTAGGAGAGACGAAGTTGTGGCTCAAGGCATCCGTTGGATCCAAGATATTCTATGGCCGGAAGGAGTGTTTTTTACGAAAGTAAAGGCAAGTGAAACGGAATCTTCTCAAACAAATGAAGCTTCATCTTCCCGGGCACCATCGGGCAGCAACAATAAACAACAAGGGTCATTCGAGGAGCAACTCGAGGCTGCCCGAAGAGCTAGCGATATCAAAAAAATGATTTTCAAGGGTGCACCTAGTACATTGGTGAGCTTGATTGGACGTAAGCAATACAAACGGTGCGCAAAAGACGTGTACTATTTTCTTCAGTCTGGTGTGTGCTTGAAGCAACTTGAGTACGGTTTACTTGAACTTGTACTCATAACCATTTTCCCTGAGCTTCAAGAGATTATATCAAATCTTCATGAGAAGGGGAAGGGGCAGGGGCAGGGGGAGGAGGACTAG 2913 41.02 METLEDLIEEAKLRTVWWGICIFAVTYLLTHTSKLMWMNVPIAILLVSGVHILLTQVDLRWKIRKSNQHSYLAHLQKKQLSVNDSRLTTLPPPPKWKRKIDSPVVEAAMDDFTNKILQEFVVDLWYSSITPDKEAPQLIHSIIMDIFAEVSMRVKDINLVDMLTRDVVDLVGDHIELFRKNQASIGREVMVTLSSEERDERLKHHLMASKELHPALISPESEYKYLKRIMGALLTAVLRPREAQCPIVRCIMRELLTCLVMEPAMRFASPGHINELIEGIFLATNKGEKDTVDDQSNPTVETQNQSSEKSQPESNNGSSSNQKSEKPSPPTPNNQKESTTTPTMASGPTTQDDSTPTRTSDWARVLEAATQRRTEVLQPENLENMWTRGRNYMKKSQKNPNVVDSGSDQNFDESFSFDGGSDGKLKWSNSGSESNIQSMTEIASPINVGGTIIQEFYSVNAGRENDVQNVNISSENNNNNNKVIRTEGHVPKLRCRVLGAFFENIDSKSFAVYSIAVTDADNKTWFVKRRYRNFERLHRHLKDIPNYTLHLPPKRIFSSSTEDAFVRQRCIQLDKYLKDLLSIANIAEQHEVWDFLSMSSKSYSFGRSTSVVKTLAVNVDDAVDDMVRQFKGGKMPKGVGPGSPSESPYSSAPNRNYSPLKQPTFDMSNIVSDYEEDGGNNKTAKYEEMESMGQVYGGYFDNDVNVKGGVSLSPKVVNKNDEQNNNKNMGLEKRNSSEVRSEILTMAANFPTTPGSKDDPLGMPAEWSPPNVSVPLLNLVDKIFQLNRRGWLRRQVFWMSKQILQLMMEDAIDDWLLRQIHWLRRDEVVAQGIRWIQDILWPEGVFFTKVKASETESSQTNEASSSRAPSGSNNKQQGSFEEQLEAARRASDIKKMIFKGAPSTLVSLIGRKQYKRCAKDVYYFLQSGVCLKQLEYGLLELVLITIFPELQEIISNLHEKGKGQGQGEED 970
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tako4g04553 970 MobiDBLite consensus disorder prediction 711 730 - -
Tako4g04553 970 MobiDBLite consensus disorder prediction 644 664 - -
Tako4g04553 970 MobiDBLite consensus disorder prediction 857 881 - -
Tako4g04553 970 PANTHER PX SERINE-THREONINE KINASE PXK 3 961 IPR051837 -
Tako4g04553 970 SMART PX-2 490 599 IPR001683 GO:0035091(InterPro)
Tako4g04553 970 Pfam PX domain 521 597 IPR001683 GO:0035091(InterPro)
Tako4g04553 970 SMART PXA-3 102 285 IPR003114 -
Tako4g04553 970 MobiDBLite consensus disorder prediction 296 359 - -
Tako4g04553 970 Pfam Sorting nexin C terminal 791 927 IPR013937 -
Tako4g04553 970 CDD PX-SNX19-like-plant 493 597 - -
Tako4g04553 970 ProSiteProfiles PX domain profile. 491 603 IPR001683 GO:0035091(InterPro)
Tako4g04553 970 Gene3D - 497 606 IPR036871 GO:0035091(InterPro)
Tako4g04553 970 MobiDBLite consensus disorder prediction 288 359 - -
Tako4g04553 970 MobiDBLite consensus disorder prediction 631 664 - -
Tako4g04553 970 Pfam PXA domain 102 278 IPR003114 -
Tako4g04553 970 MobiDBLite consensus disorder prediction 716 730 - -
Tako4g04553 970 ProSiteProfiles PXA domain profile. 102 285 IPR003114 -
Tako4g04553 970 SUPERFAMILY PX domain 493 600 IPR036871 GO:0035091(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tako4g04553 K17925 sorting nexin-13
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Event-related genes

Select Gene_1 Gene_2 Event_name
163523 Tako1g04772 Tako4g04553