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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tako4g04585 ATGTTGTACTATATTGTTGATGTGTTGTGGTACTTGTATGACGTCACGCCAACCCTCGGACATTTCCGCCAGTATCCCTGGTCCGGGGGTGTGACAAGAACCGCGCCGGAACATCCCGTCCCCACCTGCTTCAATGATTCCTGGGAAGCAATAAAGTGGGTCGCCGGTAACTGCCGAGAGCCATGGATCAACGACTACGCTGATCTTCAAAATGTGTACTTCGCCGGCGACAGTGCCGGTGCCAATATCGCCCACCAGATGGGTATTATTTTGCTCCACCCGTATTTTATGGGAGAAGATCGAATCGGGTCTGAAGGCGAACATCCATGGAAGCTAGGGCCATTTTTGGACGAAATGTGGATACTTGCCCACCCGACAACAAATGGGTTGGATGACCCGCTTATTAACCCGGATAAGGATCCGAAGGTGTCGGATCTTGGATGCTCCCGGGTACTGGTTTGTGTCGCAGAGACGGAGATCTTGAGGGATAGGGGATGGTATTATAAGGATATTTTGCACAAAAATGGGTGGAGAGGAGATATTGAGGTGATTGAGGATAAAGAGGAGGACCATGTGTTTTTCCTATCTTACCCTTCTTCTGATAATTCTTGTAGTTTGCGAAAGAGAATTTGTACTTTTATCATTCATATGTAA 654 47.86 MLYYIVDVLWYLYDVTPTLGHFRQYPWSGGVTRTAPEHPVPTCFNDSWEAIKWVAGNCREPWINDYADLQNVYFAGDSAGANIAHQMGIILLHPYFMGEDRIGSEGEHPWKLGPFLDEMWILAHPTTNGLDDPLINPDKDPKVSDLGCSRVLVCVAETEILRDRGWYYKDILHKNGWRGDIEVIEDKEEDHVFFLSYPSSDNSCSLRKRICTFIIHM 217
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tako4g04585 217 PANTHER ARYLACETAMIDE DEACETYLASE 33 204 IPR050466 -
Tako4g04585 217 SUPERFAMILY alpha-beta-Hydrolases 33 215 IPR029058 -
Tako4g04585 217 Pfam alpha-beta hydrolase fold 33 194 IPR013094 GO:0016787(InterPro)
Tako4g04585 217 ProSitePatterns Lipolytic enzymes G-D-X-G family, putative serine active site. 72 84 IPR033140 -
Tako4g04585 217 Gene3D alpha-beta hydrolase 32 216 IPR029058 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tako4g04585 - -
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Gene Family Members

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Tako1g00147 . 232 567 Carbohydrate Esterase gene family AT3G05610 55.06 4.80e-135 410.0
Tako1g00148 . 232 567 Carbohydrate Esterase gene family AT3G05610 55.06 4.80e-135 410.0
Tako1g00149 . 229 567 Carbohydrate Esterase gene family AT3G05610 54.867 1.87e-135 410.0
Tako1g00269 . 44 118 Carbohydrate Esterase gene family AT3G16970 29.87 6.21e-06 40.8
Tako1g00270 . 42 125 Carbohydrate Esterase gene family AT3G16970 30.233 5.92e-08 46.6
Tako1g00273 . 45 118 Carbohydrate Esterase gene family AT3G16970 31.579 5.96e-06 40.8
Tako1g00490 . 13 314 Carbohydrate Esterase gene family AT1G19190 38.312 8.31e-68 212.0
Tako1g01201 . 262 346 Carbohydrate Esterase gene family AT1G53840 59.091 4.42e-28 105.0
Tako1g01285 . 69 729 Carbohydrate Esterase gene family AT5G36210 68.571 0.0 954.0
Tako1g01339 . 23 255 Carbohydrate Esterase gene family AT1G68620 36.842 4.92e-50 168.0
Tako1g02934 . 130 390 Carbohydrate Esterase gene family AT1G05310 72.519 3.29e-147 416.0
Tako1g02935 . 69 390 Carbohydrate Esterase gene family AT1G05310 70.588 1.10e-179 503.0
Tako1g03146 . 30 118 Carbohydrate Esterase gene family AT3G16970 27.957 1.37e-08 48.9
Tako1g03169 . 47 118 Carbohydrate Esterase gene family AT3G16970 29.87 1.51e-06 42.4
Tako1g03332 . 30 102 Carbohydrate Esterase gene family AT3G16970 31.507 1.05e-07 47.4
Tako1g03335 . 30 102 Carbohydrate Esterase gene family AT3G16970 31.507 1.05e-07 47.4
Tako1g03805 . 108 523 Carbohydrate Esterase gene family AT4G33220 62.381 0.0 550.0
Tako1g03806 . 26 523 Carbohydrate Esterase gene family AT4G33220 60.119 0.0 632.0
Tako1g03811 . 34 547 Carbohydrate Esterase gene family AT2G26440 60.87 0.0 646.0
Tako1g03820 . 55 581 Carbohydrate Esterase gene family AT1G53830 41.373 8.79e-129 389.0
Tako1g04025 . 61 357 Carbohydrate Esterase gene family AT5G47500 49.329 9.20e-103 306.0
Tako1g04107 . 68 592 Carbohydrate Esterase gene family AT3G14310 61.132 0.0 640.0
Tako1g04109 . 333 592 Carbohydrate Esterase gene family AT3G14310 73.077 8.20e-136 392.0
Tako1g04111 . 62 461 Carbohydrate Esterase gene family AT1G53830 60.25 3.12e-166 477.0
Tako1g04113 . 166 479 Carbohydrate Esterase gene family AT1G53840 57.413 1.91e-121 358.0
Tako1g04707 . 60 357 Carbohydrate Esterase gene family AT5G47500 42.809 1.18e-84 258.0
Tako1g04755 . 364 447 Carbohydrate Esterase gene family AT5G09760 44.048 1.66e-17 77.0
Tako1g04781 . 262 346 Carbohydrate Esterase gene family AT1G53840 59.091 7.15e-28 104.0
Tako1g04796 ACH 3 284 Carbohydrate Esterase gene family AT1G19190 42.857 2.07e-81 248.0
Tako1g05368 . 11 571 Carbohydrate Esterase gene family AT4G02330 59.397 0.0 685.0
Tako1g05434 ACH 1 353 Carbohydrate Esterase gene family AT3G63010 73.109 0.0 546.0
Tako1g05571 . 83 606 Carbohydrate Esterase gene family AT4G33230 38.547 7.34e-119 361.0
Tako1g05766 . 93 606 Carbohydrate Esterase gene family AT4G33230 34.659 4.14e-90 285.0
Tako2g00435 ACH 4 325 Carbohydrate Esterase gene family AT3G48700 43.478 7.57e-84 254.0
Tako2g00482 . 33 104 Carbohydrate Esterase gene family AT3G63010 50.0 3.62e-14 68.9
Tako2g00528 . 29 118 Carbohydrate Esterase gene family AT3G16970 28.723 1.08e-09 52.0
Tako2g04434 . 46 101 Carbohydrate Esterase gene family AT3G16970 35.714 2.13e-07 44.7
Tako2g04939 . 20 342 Carbohydrate Esterase gene family AT5G16080 54.103 2.74e-118 343.0
Tako2g05189 . 41 422 Carbohydrate Esterase gene family AT3G02410 61.88 8.09e-171 483.0
Tako2g05321 . 160 346 Carbohydrate Esterase gene family AT1G53840 50.0 2.83e-51 171.0
Tako2g05369 . 262 346 Carbohydrate Esterase gene family AT1G53840 57.955 4.86e-27 102.0
Tako2g06951 . 32 359 Carbohydrate Esterase gene family AT5G61570 53.982 9.23e-110 323.0
Tako2g07009 . 114 594 Carbohydrate Esterase gene family AT3G47400 56.432 0.0 552.0
Tako2g07010 ACH 59 217 Carbohydrate Esterase gene family AT3G14310 28.221 6.96e-17 75.9
Tako2g07011 ACH 59 217 Carbohydrate Esterase gene family AT3G14310 28.221 1.39e-16 75.5
Tako2g07012 ACH 59 217 Carbohydrate Esterase gene family AT3G14310 26.415 1.17e-16 75.5
Tako2g07013 ACH 59 216 Carbohydrate Esterase gene family AT3G14310 29.375 1.17e-19 84.0
Tako2g07019 . 11 511 Carbohydrate Esterase gene family AT2G45220 62.279 0.0 671.0
Tako2g07020 . 65 511 Carbohydrate Esterase gene family AT2G45220 39.615 6.33e-108 327.0
Tako2g07021 . 2 511 Carbohydrate Esterase gene family AT2G45220 38.447 1.01e-120 362.0
Tako2g07195 . 8 409 Carbohydrate Esterase gene family AT5G23870 62.376 0.0 533.0
Tako2g07280 . 419 709 Carbohydrate Esterase gene family AT5G36210 22.876 1.39e-08 56.6
Tako2g07281 . 419 709 Carbohydrate Esterase gene family AT5G36210 22.876 1.39e-08 56.6
Tako3g00116 . 1 446 Carbohydrate Esterase gene family AT5G14310 68.387 0.0 635.0
Tako3g00373 . 59 352 Carbohydrate Esterase gene family AT5G47500 37.542 2.42e-65 207.0
Tako3g00378 . 59 352 Carbohydrate Esterase gene family AT5G47500 37.542 1.51e-65 208.0
Tako3g01183 . 1 118 Carbohydrate Esterase gene family AT3G16970 31.298 3.55e-06 42.4
Tako3g01383 . 55 581 Carbohydrate Esterase gene family AT1G53830 41.373 8.79e-129 389.0
Tako3g02155 . 107 321 Carbohydrate Esterase gene family AT5G16080 34.081 2.72e-36 129.0
Tako3g02156 ACH 36 251 Carbohydrate Esterase gene family AT1G68620 36.161 3.32e-42 146.0
Tako3g03201 . 1 581 Carbohydrate Esterase gene family AT1G53840 55.29 0.0 637.0
Tako3g03203 . 83 341 Carbohydrate Esterase gene family AT3G14310 62.934 8.75e-99 298.0
Tako3g03210 . 13 592 Carbohydrate Esterase gene family AT3G14310 62.842 0.0 717.0
Tako3g03211 . 1 592 Carbohydrate Esterase gene family AT3G14310 61.944 0.0 716.0
Tako3g03212 . 1 199 Carbohydrate Esterase gene family AT3G14310 47.664 1.83e-49 168.0
Tako3g03216 . 13 592 Carbohydrate Esterase gene family AT3G14310 65.195 0.0 741.0
Tako3g03217 . 13 592 Carbohydrate Esterase gene family AT3G14310 65.535 0.0 746.0
Tako3g04416 . 145 324 Carbohydrate Esterase gene family AT1G53840 40.0 5.32e-28 107.0
Tako3g04543 . 262 346 Carbohydrate Esterase gene family AT1G53840 59.091 4.21e-28 105.0
Tako3g05399 . 2 267 Carbohydrate Esterase gene family AT3G10710 39.928 8.45e-53 178.0
Tako3g05880 . 9 330 Carbohydrate Esterase gene family AT1G68620 52.537 8.23e-121 350.0
Tako3g06044 ACH 68 226 Carbohydrate Esterase gene family AT5G53370 32.143 8.04e-19 82.0
Tako4g00024 . 93 606 Carbohydrate Esterase gene family AT4G33230 34.659 3.21e-90 285.0
Tako4g00081 . 34 518 Carbohydrate Esterase gene family AT4G02320 53.144 0.0 531.0
Tako4g00082 . 11 571 Carbohydrate Esterase gene family AT4G02330 59.147 0.0 686.0
Tako4g00104 . 52 199 Carbohydrate Esterase gene family AT4G15980 29.801 2.99e-17 77.0
Tako4g00174 ACH 1 343 Carbohydrate Esterase gene family AT3G63010 74.64 0.0 546.0
Tako4g03582 . 38 554 Carbohydrate Esterase gene family AT1G23200 52.662 0.0 522.0
Tako4g04349 . 262 346 Carbohydrate Esterase gene family AT1G53840 56.18 1.80e-25 98.2
Tako4g04581 . 109 313 Carbohydrate Esterase gene family AT1G19190 41.038 4.44e-47 155.0
Tako4g04583 . 14 192 Carbohydrate Esterase gene family AT1G49660 40.782 4.73e-43 145.0
Tako4g04585 . 116 325 Carbohydrate Esterase gene family AT3G48700 40.476 1.78e-42 145.0
Tako4g04586 . 195 325 Carbohydrate Esterase gene family AT3G48700 40.458 1.67e-24 94.4
Tako4g04587 ACH 193 325 Carbohydrate Esterase gene family AT3G48700 41.353 3.15e-23 90.9
Tako4g05210 . 8 543 Carbohydrate Esterase gene family AT3G05620 64.825 0.0 709.0
Tako4g05214 . 17 570 Carbohydrate Esterase gene family AT3G05610 47.687 0.0 572.0
Tako4g05289 . 4 416 Carbohydrate Esterase gene family AT5G26670 67.548 0.0 597.0
Tako4g05384 . 4 416 Carbohydrate Esterase gene family AT5G26670 67.548 0.0 597.0
Tako4g05645 . 151 515 Carbohydrate Esterase gene family AT5G49180 50.409 7.25e-126 371.0
Tako4g05655 . 204 566 Carbohydrate Esterase gene family AT5G49180 52.603 1.11e-137 402.0
Tako4g05662 . 10 390 Carbohydrate Esterase gene family AT5G49180 43.229 1.85e-96 296.0
Tako4g05678 . 204 566 Carbohydrate Esterase gene family AT5G49180 52.603 1.17e-136 399.0
Tako5g01625 . 41 205 Carbohydrate Esterase gene family AT1G25141 26.087 8.78e-09 53.9
Tako5g01694 . 45 546 Carbohydrate Esterase gene family AT5G09760 58.607 0.0 621.0
Tako5g02565 . 191 314 Carbohydrate Esterase gene family AT1G19190 41.27 1.54e-21 85.1
Tako5g02566 . 12 304 Carbohydrate Esterase gene family AT3G48700 40.816 5.48e-68 212.0
Tako5g02618 ACH 72 228 Carbohydrate Esterase gene family AT5G53370 27.545 9.79e-14 67.8
Tako5g02863 . 1 476 Carbohydrate Esterase gene family AT1G26120 53.737 4.30e-176 501.0
Tako5g03121 . 27 597 Carbohydrate Esterase gene family AT3G49220 62.393 0.0 754.0
Tako5g03267 ACH 59 218 Carbohydrate Esterase gene family AT3G14310 31.902 4.54e-19 82.4
Tako5g03269 . 51 218 Carbohydrate Esterase gene family AT1G53830 30.357 1.40e-16 74.7
Tako5g03270 ACH 51 218 Carbohydrate Esterase gene family AT1G53830 27.811 5.60e-16 72.4
Tako5g03271 ACH 62 216 Carbohydrate Esterase gene family AT1G53830 36.538 7.66e-26 100.0
Tako5g03274 . 70 536 Carbohydrate Esterase gene family AT5G51490 53.277 5.68e-174 497.0
Tako5g03290 . 32 361 Carbohydrate Esterase gene family AT5G61570 50.437 5.36e-103 306.0
Tako5g03478 . 45 118 Carbohydrate Esterase gene family AT3G16970 28.571 2.31e-06 41.6
Tako5g03479 . 45 118 Carbohydrate Esterase gene family AT3G16970 33.735 1.81e-06 42.0
Tako6g00060 . 50 213 Carbohydrate Esterase gene family AT3G14310 27.439 8.50e-19 81.6
Tako6g00062 . 53 213 Carbohydrate Esterase gene family AT3G14310 28.834 7.82e-17 76.3
Tako6g00596 ACH 3 375 Carbohydrate Esterase gene family AT4G19420 48.556 2.02e-143 411.0
Tako6g00619 ACH 8 302 Carbohydrate Esterase gene family AT4G19410 52.0 2.45e-117 342.0
Tako6g00620 . 8 302 Carbohydrate Esterase gene family AT4G19410 50.333 1.43e-109 322.0
Tako6g00621 . 8 302 Carbohydrate Esterase gene family AT4G19410 52.0 2.45e-117 342.0
Tako6g00622 . 8 302 Carbohydrate Esterase gene family AT4G19410 52.0 2.45e-117 342.0
Tako6g00623 . 6 380 Carbohydrate Esterase gene family AT4G19420 50.914 1.49e-142 409.0
Tako6g00629 . 239 554 Carbohydrate Esterase gene family AT1G23200 55.046 2.28e-121 371.0
Tako6g00861 . 151 566 Carbohydrate Esterase gene family AT5G49180 50.239 1.39e-151 439.0
Tako6g01338 . 30 118 Carbohydrate Esterase gene family AT3G16970 34.066 8.31e-08 45.8
Tako6g02570 . 31 417 Carbohydrate Esterase gene family AT3G02410 68.557 0.0 561.0
Tako6g02571 . 31 267 Carbohydrate Esterase gene family AT3G02410 73.109 5.54e-128 369.0
Tako6g02572 . 31 417 Carbohydrate Esterase gene family AT3G02410 68.557 0.0 561.0
Tako6g03040 ACH 262 346 Carbohydrate Esterase gene family AT1G53840 59.091 9.98e-28 104.0
Tako6g04103 . 1 132 Carbohydrate Esterase gene family AT3G63010 61.765 1.39e-51 166.0
Tako6g04127 . 14 511 Carbohydrate Esterase gene family AT2G45220 65.089 0.0 695.0
Tako6g04132 . 14 511 Carbohydrate Esterase gene family AT2G45220 65.089 0.0 695.0
Tako6g04141 . 16 511 Carbohydrate Esterase gene family AT2G45220 60.516 0.0 617.0
Tako6g04206 ACH 58 245 Carbohydrate Esterase gene family AT1G68620 36.598 4.70e-38 135.0
Tako6g04381 . 281 492 Carbohydrate Esterase gene family AT5G49180 58.491 2.96e-85 263.0
Tako6g04384 . 151 566 Carbohydrate Esterase gene family AT5G49180 50.239 1.76e-150 436.0
Tako6g04392 . 151 566 Carbohydrate Esterase gene family AT5G49180 50.957 1.85e-153 444.0
Tako7g00184 ACH 36 315 Carbohydrate Esterase gene family AT1G68620 36.364 5.69e-43 149.0
Tako7g00189 ACH 36 251 Carbohydrate Esterase gene family AT1G68620 36.161 3.32e-42 146.0
Tako7g00190 . 55 321 Carbohydrate Esterase gene family AT5G16080 34.859 4.36e-47 160.0
Tako7g00234 . 79 224 Carbohydrate Esterase gene family AT5G53370 28.205 1.07e-09 55.5
Tako7g00238 . 47 210 Carbohydrate Esterase gene family AT3G05620 26.036 5.85e-09 52.8
Tako7g00239 . 34 200 Carbohydrate Esterase gene family AT3G05620 23.563 8.31e-08 50.1
Tako7g00243 . 11 511 Carbohydrate Esterase gene family AT2G45220 66.085 0.0 699.0
Tako7g02312 . 289 356 Carbohydrate Esterase gene family AT4G19420 38.235 5.29e-11 59.3
Tako7g02330 . 2 415 Carbohydrate Esterase gene family AT3G05910 67.225 0.0 597.0
Tako7g02737 . 275 390 Carbohydrate Esterase gene family AT3G05610 32.759 1.83e-11 63.5
Tako7g02786 . 3 138 Carbohydrate Esterase gene family AT4G19420 64.234 3.38e-64 199.0
Tako7g02981 ACH 91 389 Carbohydrate Esterase gene family AT4G19420 64.333 6.06e-155 437.0
Tako7g02982 ACH 7 389 Carbohydrate Esterase gene family AT4G19420 63.636 0.0 546.0
Tako7g03460 . 56 218 Carbohydrate Esterase gene family AT1G53830 27.879 8.22e-11 57.4
Tako7g03844 . 160 245 Carbohydrate Esterase gene family AT1G53840 48.837 4.88e-17 73.2
Tako7g04515 . 2 247 Carbohydrate Esterase gene family AT1G53840 34.127 6.68e-39 140.0
Tako8g00956 . 2 282 Carbohydrate Esterase gene family AT2G41530 79.433 4.39e-176 486.0
Tako8g00957 . 2 282 Carbohydrate Esterase gene family AT2G41530 79.433 2.41e-174 498.0
Tako8g00958 . 2 282 Carbohydrate Esterase gene family AT2G41530 79.433 2.17e-174 498.0
Tako8g00959 . 2 282 Carbohydrate Esterase gene family AT2G41530 79.433 1.78e-176 486.0
Tako8g00981 . 1 612 Carbohydrate Esterase gene family AT2G26450 47.106 0.0 548.0
Tako8g01041 . 58 211 Carbohydrate Esterase gene family AT3G05610 26.282 3.67e-15 70.9
Tako8g01859 . 278 511 Carbohydrate Esterase gene family AT2G45220 56.723 6.56e-90 274.0
Tako8g02207 ACH 4 325 Carbohydrate Esterase gene family AT3G48700 43.519 1.76e-84 256.0
Tako8g03004 . 53 592 Carbohydrate Esterase gene family AT3G14310 59.259 0.0 625.0
Tako8g03007 . 53 592 Carbohydrate Esterase gene family AT3G14310 58.519 0.0 613.0
Tako8g03008 . 53 592 Carbohydrate Esterase gene family AT3G14310 55.083 0.0 584.0
Tako8g03009 . 58 329 Carbohydrate Esterase gene family AT3G14310 44.322 2.38e-61 202.0
Tako8g03010 . 58 583 Carbohydrate Esterase gene family AT1G53830 56.546 0.0 583.0
Tako8g03096 . 58 357 Carbohydrate Esterase gene family AT5G47500 38.816 2.94e-78 242.0
Tako8g03474 . 91 393 Carbohydrate Esterase gene family AT1G05310 55.116 1.15e-125 366.0
Tako8g03484 . 97 389 Carbohydrate Esterase gene family AT1G05310 52.218 7.66e-111 328.0
Tako8g04333 . 32 128 Carbohydrate Esterase gene family AT3G16970 30.476 1.25e-06 43.5
Tako8g04409 . 262 376 Carbohydrate Esterase gene family AT1G53840 48.305 1.39e-27 107.0
Tako8g05044 . 4 329 Carbohydrate Esterase gene family AT3G48700 48.16 8.31e-98 291.0
Tako8g05045 . 4 329 Carbohydrate Esterase gene family AT3G48700 48.16 9.05e-102 301.0