AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tako4g04659 ATGGCGAGTTATGGCATCCACGGCAATCTCCTTGAAGTCACCGTTGTTAGCTGCAATAAACTGAAAGATACGGAATGGATCTCGAAGCAAGATCCATATGTTTGTATTGAATACGGTACCAACAAATCTTCGACTCGTACCTGCAAAGATGGAGGCAAGAACCCTACATTCCAAGAGAAATTCGTCTACAGCTTAGTTGAAGGACTAAGAGATTTGAATGTTACAGTTTGGAATAGCAATACAATCACACATGATGATTTCATCGGTAGTGGAAAGATTCCTTTGGCAAAGGTTCTTTCTCAGGGATTTGATGAAAGCAGTTGGCCATTACAAAGTAAACATGGAAGGCATGCCGGAGAGGTTCGATTGATTATGCATTATTCCAATTCCAATGCCAATAAACATGGAAACGATTATGCTCAGAAACCATCAAAAGGTTTTGCTCCATCAGCTCCACCGTATGTACCAGAGAATGCACCACCGCCGCCCATGTACTTTGCACCACCACCGCCGGCAGCATCTTACCCTTTACAAGGCGGAGCATATCCTCCGGTACCTGGCGGAGTATACCCTCCACCTTCTCCCTTCCCTTCATACCCACCTAGTTCAGGTGTTTATCCGCCGACTCCATACCCACCTCAGGCAACTCCTTATCATCCGCCGGCGTACCCATCGAATTCAGCTTATGGATCACATTATCCCCCTGCTTCTGGAGCGTATCCTCCATCGCCATATTAA 738 46.07 MASYGIHGNLLEVTVVSCNKLKDTEWISKQDPYVCIEYGTNKSSTRTCKDGGKNPTFQEKFVYSLVEGLRDLNVTVWNSNTITHDDFIGSGKIPLAKVLSQGFDESSWPLQSKHGRHAGEVRLIMHYSNSNANKHGNDYAQKPSKGFAPSAPPYVPENAPPPPMYFAPPPPAASYPLQGGAYPPVPGGVYPPPSPFPSYPPSSGVYPPTPYPPQATPYHPPAYPSNSAYGSHYPPASGAYPPSPY 245
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tako4g04659 245 MobiDBLite consensus disorder prediction 201 224 - -
Tako4g04659 245 SUPERFAMILY C2 domain (Calcium-lipid-binding domain, CaLB) 4 129 IPR035892 -
Tako4g04659 245 Gene3D C2 domain 9 129 IPR035892 -
Tako4g04659 245 SMART C2-3c 10 107 IPR000008 -
Tako4g04659 245 CDD C2 11 108 - -
Tako4g04659 245 ProSiteProfiles C2 domain profile. 1 109 IPR000008 -
Tako4g04659 245 MobiDBLite consensus disorder prediction 132 154 - -
Tako4g04659 245 Pfam C2 domain 10 102 IPR000008 -
Tako4g04659 245 MobiDBLite consensus disorder prediction 201 220 - -
Tako4g04659 245 PANTHER CONSERVED SERINE PROLINE-RICH PROTEIN (AFU-ORTHOLOGUE AFUA-2G01790) 1 243 IPR052981 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tako4g04659 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
163537 Tako1g04840 Tako4g04659
163853 Tako2g00452 Tako4g04659