AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tako5g02508 ATGTACCGACATATGGCGGCAGATCAGACTCATGGTGGACAACCTACTGACAATGGAGATGCTGTAGTAACTCTTGATCAAATTCCTAGATGGAGTGATGGAGATTTTAGATACTCTTATGAAATTGAAGATCCCAATTTTCCAAATTCACACTTTCCCGACCCCTTGGCTTCATCTTCCGGGACAGACATTAGTGGAAAAGTTTCAAGGTTTCCAGTTGATCATGAAGTTAACTCCAAAATCTATCTATGGAGAGGAAACCCATGGAACCTTGAGGTAGATGCTGTAGTCAACTCCACAAATGAGAATTTAGATGAAACACAATGCAGCCCTGGTTTGCATGCTGCAGCTGGCCCTGGTCTAGCTGAAGAATGTGCAACACTGGGTGGCTGTAGAACAGGGATGGCGAAAGTTACTAATGCTTATGATCTTCCAGCAAGGAGAGTTATACATACAGTTGGACCTAAGTATGCTGTAAAGTATCATACTGCAGCAGAAAATGCTTTAAGTCACTGCTATCGCTCTTGTCTAGAACTCCTCATAGAAAATGGACTTCAAAGCATTGCTATGGGTTGTATATACACAGAAGCCAAGAATTATCCACGTGAACCAGCCGCCCATGTGGCAATAAGAACTGTTCGCAGGTTGCTTGAGAAACAAAAGGATAAAATCACAGGTGTTGTATTTTGCTTGACAACAACAAACGATACTGAAATATATAAAAGACTACTTCCACTCTACTTTCCCCGTGACAAAAAAGAGGAAGAGATTGCAATTTCAAAGCTTCCAGCTGATGTTGGAGATGAAAATGGTGAAACAGTAATAGACGAAAGAAAAATCAGAATAAAACCATTACCAAATGTCAAGAAAAATAACCCTAAACCTCTTAGAGCCTCACTAGATGTTCCTGTCAGTGATCTTGGAATGGCCAGGCGGAACTCTTCGCATTTGGAATCGTATCTAGATCCTGCTTTTATGTCTATAATTAAAGATCCTGATCAAAGGCGTAAGGAACAGTGGGAAAGAACAGCTAGAGCTCAAAATGGGTTCAATTTTGCTAAAATATTAGGGTTTGGTGATCTTGGAGGTCCTAAACTTTCTGCTGCTGAAGAATATTCTCTTCATTCCAGATACCTTGCTAAAGCAAATTCTATGAATCTTTCTGAAATAGCCGAAATGAAAATTCTGTACAGGGGAGGGGTAGATAGTGAAGGTCGTCCAGTAATGGTAGTAGTTGGAGCACATTTTCTCCTTCGTTGTCTTGATCTTGAAAGATTTGTTCTTTATGTAGTCAAGGAGTTTGAGCCGTTGATCCAAAAACCTTATAGCATTGTTTACTTCCACTCTGCTGCATCTTTACAAGTACAGCCGGATTTGGGATTTATGAGGAAACTGCAGCAAATACTTGGTAGGAAAAGCCAGCGCAATCTTCATGCAATATACATCCTGCACCCGACCTTTGGACTGAAGGCTGCCATACTTGCATTACAACTATTAGTCGATGGCATGGTGTGGAAAAAGGCTGTATACGTTGATCGACTTCTTCAGCTTTTCAGATACGTTCCTCGTGAACAGCTAACTATTCCCGACTTCGTCTTCCAGCATGATCTTGAAGTAAATGGAGGAAAAGGGCTAATTGTGGACCCAAGGACAAAATACGTATACCAACGACCTTAG 1677 41.09 MYRHMAADQTHGGQPTDNGDAVVTLDQIPRWSDGDFRYSYEIEDPNFPNSHFPDPLASSSGTDISGKVSRFPVDHEVNSKIYLWRGNPWNLEVDAVVNSTNENLDETQCSPGLHAAAGPGLAEECATLGGCRTGMAKVTNAYDLPARRVIHTVGPKYAVKYHTAAENALSHCYRSCLELLIENGLQSIAMGCIYTEAKNYPREPAAHVAIRTVRRLLEKQKDKITGVVFCLTTTNDTEIYKRLLPLYFPRDKKEEEIAISKLPADVGDENGETVIDERKIRIKPLPNVKKNNPKPLRASLDVPVSDLGMARRNSSHLESYLDPAFMSIIKDPDQRRKEQWERTARAQNGFNFAKILGFGDLGGPKLSAAEEYSLHSRYLAKANSMNLSEIAEMKILYRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLYVVKEFEPLIQKPYSIVYFHSAASLQVQPDLGFMRKLQQILGRKSQRNLHAIYILHPTFGLKAAILALQLLVDGMVWKKAVYVDRLLQLFRYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRTKYVYQRP 558
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tako5g02508 558 MobiDBLite consensus disorder prediction 1 21 - -
Tako5g02508 558 SMART YBR022w-8 80 209 IPR002589 -
Tako5g02508 558 Pfam Divergent CRAL-TRIO domain 405 536 IPR001251 -
Tako5g02508 558 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 17 282 - -
Tako5g02508 558 CDD SEC14 393 529 IPR001251 -
Tako5g02508 558 CDD Macro-GDAP2-like 79 247 IPR035793 -
Tako5g02508 558 Gene3D - 388 539 IPR036865 -
Tako5g02508 558 SUPERFAMILY Macro domain-like 65 277 IPR043472 -
Tako5g02508 558 Pfam Macro domain 97 209 IPR002589 -
Tako5g02508 558 SMART sec14-4 389 535 IPR001251 -
Tako5g02508 558 ProSiteProfiles Macro domain profile. 68 248 IPR002589 -
Tako5g02508 558 Gene3D Leucine Aminopeptidase, subunit E, domain 1 14 253 IPR043472 -
Tako5g02508 558 SUPERFAMILY CRAL-TRIO domain 387 526 IPR036865 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tako5g02508 K24997 ganglioside-induced differentiation-associated protein 2
Tako5g02508 K23518 O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]