AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tako6g02979 ATGCCTTCTATCCCTGAAGAGCCTCTTCTTGCTCCAAACCCAGATCGATTCTGTATGTTCCCAATTCAGTACCCTCAAATTTGGGAAATGTACAAGAAAGCCGAAGCTTCCTTTTGGACCGCCGAAGAGGTCGATTTATCTGAGGATCAACGTCACTGGGACTCGTTAACAGACGGCGAGAGGCACTTCATCACCCATGTCCTTGCCTTCTTCGCCGCCTCAGATGGCATCGTTTTGGAAAACCTAGCCGGACGCTTCATGAAAGAGGTTCAAGTTGCGGAGGCGCGTGCTTTCTACGGATTCCAGATTGCCATAGAGAACATCCACTCCGAGATGTACAGTTTGCTTCTCGAATCCTACATTAAGGACTCTAATGAGAAAAGCAGACTCTTTCGAGCAATTGAGACTATTCCTTGTGTCGAGAAGAAAGCGAATTGGGCTCTCAAATGGATCGATGGCTCGGAGACGTTTGCAGAGCGTATCATCGCGTTCGCGTGTGTCGAAGGGATATTTTTTTCTGGAAGCTTTTGCGCGATATTTTGGTTGAAGAAACGGGGGTTGATGCCTGGATTGACATTCTCGAACGAACTGATCTCGCGAGACGAAGGATTACATTGTGATTTCGCTTGTTTGCTTTACGGGTTACTGAAGACGAAGTTGAGTGAGGAGCGAGTCAAGGGAATCATCTCTGATGCGGTGGCGATTGAACGAGAATTCGTCTGCGATGCCTTACCTTGCGCTCTTGTAGGGATGAACGGTGATCTCATGAGTAAATACATCGAATTCGTTGCCGATAGATTATTAGGCGCATTAGGTTACGGGAAATTGTACAACGCCCAGAACCCGTTTGATTGGATGGAGCTGATTTCGTTACAAGGGAAGACTAATTTCTTCGAGAAAAGGGTGGGCGAGTATCAGAAAGCTTCTGTGATGTCGAATTTGAACGGAAATGGAGACTCACATGTCTTCAAGATGGACGAAGATTTCTAA 990 46.67 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSEDQRHWDSLTDGERHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLESYIKDSNEKSRLFRAIETIPCVEKKANWALKWIDGSETFAERIIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYGLLKTKLSEERVKGIISDAVAIEREFVCDALPCALVGMNGDLMSKYIEFVADRLLGALGYGKLYNAQNPFDWMELISLQGKTNFFEKRVGEYQKASVMSNLNGNGDSHVFKMDEDF 329
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tako6g02979 329 PANTHER RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN 6 329 IPR000358 GO:0009263(InterPro)
Tako6g02979 329 Gene3D Ribonucleotide Reductase, subunit A 3 307 IPR012348 GO:0016491(InterPro)
Tako6g02979 329 ProSitePatterns Ribonucleotide reductase small subunit signature. 105 121 IPR030475 -
Tako6g02979 329 Pfam Ribonucleotide reductase, small chain 16 282 IPR000358 GO:0009263(InterPro)
Tako6g02979 329 CDD RNRR2 17 291 IPR033909 GO:0009263(InterPro)
Tako6g02979 329 SUPERFAMILY Ferritin-like 4 307 IPR009078 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tako6g02979 K10808 ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
Tako6g02979 K00526 ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
164197 Tako2g05556 Tako6g02979